RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 APEX2Q9UBZ4 518 aa9.08□□□□□ -0.96
APP-213ENST00000464867 SLC23A2Q9UGH3 650 aa9.08□□□□□ -0.96
APP-213ENST00000464867 AP1M2Q9Y6Q5 423 aa9.08□□□□□ -0.96
APP-213ENST00000464867 HCFC1P51610 2035 aa9.08□□□□□ -0.96
APP-213ENST00000464867 HIVEP2P31629 2446 aa9.07□□□□□ -0.96
APP-213ENST00000464867 C17orf113A0A1B0GUU1 675 aa9.07□□□□□ -0.96
APP-213ENST00000464867 RGSL1A5PLK6 1076 aa9.07□□□□□ -0.96
APP-213ENST00000464867 OR6C74A6NCV1 312 aa9.07□□□□□ -0.96
APP-213ENST00000464867 A6NHS1 94 aa9.07□□□□□ -0.96
APP-213ENST00000464867 FADS2P1A8MWK0 482 aa9.07□□□□□ -0.96
APP-213ENST00000464867 ALOX12BO75342 701 aa9.07□□□□□ -0.96
APP-213ENST00000464867 LSM8O95777 96 aaKnown RBP9.07□□□□□ -0.96
APP-213ENST00000464867 GNA14O95837 355 aa9.07□□□□□ -0.96
APP-213ENST00000464867 MSL3P1P0C860 447 aa9.07□□□□□ -0.96
APP-213ENST00000464867 UNGP13051 313 aaPredicted RBP9.07□□□□□ -0.96
APP-213ENST00000464867 ACPPP15309 386 aa9.07□□□□□ -0.96
APP-213ENST00000464867 EPHA1P21709 976 aa9.07□□□□□ -0.96
APP-213ENST00000464867 AIF1P55008 147 aa9.07□□□□□ -0.96
APP-213ENST00000464867 SLC10A7Q0GE19 358 aa9.07□□□□□ -0.96
APP-213ENST00000464867 TUBB8Q3ZCM7 444 aa9.07□□□□□ -0.96
APP-213ENST00000464867 KRTCAP3Q53RY4 240 aa9.07□□□□□ -0.96
APP-213ENST00000464867 COBLL1Q53SF7 1204 aa9.07□□□□□ -0.96
APP-213ENST00000464867 ZNF569Q5MCW4 686 aa9.07□□□□□ -0.96
APP-213ENST00000464867 C1orf189Q5VU69 101 aa9.07□□□□□ -0.96
APP-213ENST00000464867 CCDC110Q8TBZ0 833 aa9.07□□□□□ -0.96
APP-213ENST00000464867 PROKR1Q8TCW9 393 aa9.07□□□□□ -0.96
APP-213ENST00000464867 CCHCR1Q8TD31 782 aa9.07□□□□□ -0.96
APP-213ENST00000464867 PHF10Q8WUB8 498 aaKnown RBP9.07□□□□□ -0.96
APP-213ENST00000464867 NSMCE1Q8WV22 266 aa9.07□□□□□ -0.96
APP-213ENST00000464867 ZFPM2Q8WW38 1151 aa9.07□□□□□ -0.96
APP-213ENST00000464867 PIH1D2Q8WWB5 315 aa9.07□□□□□ -0.96
APP-213ENST00000464867 CENPIQ92674 756 aaPredicted RBP9.07□□□□□ -0.96
APP-213ENST00000464867 CRACR2AQ9BSW2 395 aa9.07□□□□□ -0.96
APP-213ENST00000464867 TXLNGQ9NUQ3 528 aa9.07□□□□□ -0.96
APP-213ENST00000464867 PKD2L2Q9NZM6 624 aa9.07□□□□□ -0.96
APP-213ENST00000464867 HPSEQ9Y251 543 aa9.07□□□□□ -0.96
APP-213ENST00000464867 PLEKHA6Q9Y2H5 1048 aa9.07□□□□□ -0.96
APP-213ENST00000464867 MRPS2Q9Y399 296 aaKnown RBP9.07□□□□□ -0.96
APP-213ENST00000464867 FHOD1Q9Y613 1164 aa9.07□□□□□ -0.96
APP-213ENST00000464867 A0A0J9YYE9 177 aa9.06□□□□□ -0.96
APP-213ENST00000464867 GSAPA4D1B5 854 aa9.06□□□□□ -0.96
APP-213ENST00000464867 C2CD4BA6NLJ0 364 aa9.06□□□□□ -0.96
APP-213ENST00000464867 RNF212BA8MTL3 300 aa9.06□□□□□ -0.96
APP-213ENST00000464867 MATN2O00339 956 aa9.06□□□□□ -0.96
APP-213ENST00000464867 CHUKO15111 745 aa9.06□□□□□ -0.96
APP-213ENST00000464867 KCNJ13O60928 360 aa9.06□□□□□ -0.96
APP-213ENST00000464867 OR2B3O76000 313 aa9.06□□□□□ -0.96
APP-213ENST00000464867 KLHL18O94889 574 aa9.06□□□□□ -0.96
APP-213ENST00000464867 SLCO2B1O94956 709 aa9.06□□□□□ -0.96
APP-213ENST00000464867 CLDN7O95471 211 aa9.06□□□□□ -0.96
APP-213ENST00000464867 TRBC1P01850 177 aa9.06□□□□□ -0.96
APP-213ENST00000464867 NEFLP07196 543 aa9.06□□□□□ -0.96
APP-213ENST00000464867 UMODP07911 640 aa9.06□□□□□ -0.96
APP-213ENST00000464867 CBSLP0DN79 551 aa9.06□□□□□ -0.96
APP-213ENST00000464867 ABOP16442 354 aa9.06□□□□□ -0.96
APP-213ENST00000464867 DESP17661 470 aa9.06□□□□□ -0.96
APP-213ENST00000464867 IGFBP2P18065 325 aa9.06□□□□□ -0.96
APP-213ENST00000464867 ITGAXP20702 1163 aa9.06□□□□□ -0.96
APP-213ENST00000464867 CBSP35520 551 aa9.06□□□□□ -0.96
APP-213ENST00000464867 NDUFA8P51970 172 aa9.06□□□□□ -0.96
APP-213ENST00000464867 KPNA2P52292 529 aaKnown RBP9.06□□□□□ -0.96
APP-213ENST00000464867 XRCC4Q13426 336 aa9.06□□□□□ -0.96
APP-213ENST00000464867 SLC9A5Q14940 896 aa9.06□□□□□ -0.96
APP-213ENST00000464867 ZNF789Q5FWF6 425 aa9.06□□□□□ -0.96
APP-213ENST00000464867 ZFYVE27Q5T4F4 411 aa9.06□□□□□ -0.96
APP-213ENST00000464867 ZNF648Q5T619 568 aaPredicted RBP9.06□□□□□ -0.96
APP-213ENST00000464867 HENMT1Q5T8I9 393 aaKnown RBP9.06□□□□□ -0.96
APP-213ENST00000464867 FBXO38Q6PIJ6 1188 aa9.06□□□□□ -0.96
APP-213ENST00000464867 ADGRG6Q86SQ4 1221 aa9.06□□□□□ -0.96
APP-213ENST00000464867 CPA5Q8WXQ8 436 aa9.06□□□□□ -0.96
APP-213ENST00000464867 FOXD4L4Q8WXT5 416 aaPredicted RBP9.06□□□□□ -0.96
APP-213ENST00000464867 HAS2Q92819 552 aa9.06□□□□□ -0.96
APP-213ENST00000464867 SPATA16Q9BXB7 569 aa9.06□□□□□ -0.96
APP-213ENST00000464867 NAA15Q9BXJ9 866 aaKnown RBP9.06□□□□□ -0.96
APP-213ENST00000464867 MRM3Q9HC36 420 aaKnown RBP9.06□□□□□ -0.96
APP-213ENST00000464867 ARFGAP3Q9NP61 516 aa9.06□□□□□ -0.96
APP-213ENST00000464867 PLA2G3Q9NZ20 509 aa9.06□□□□□ -0.96
APP-213ENST00000464867 PPT2Q9UMR5 302 aa9.06□□□□□ -0.96
APP-213ENST00000464867 CDYLQ9Y232 598 aa9.06□□□□□ -0.96
APP-213ENST00000464867 TLN2Q9Y4G6 2542 aa9.06□□□□□ -0.96
APP-213ENST00000464867 VPS13CQ709C8 3753 aa9.06□□□□□ -0.96
APP-213ENST00000464867 C1orf232A0A0U1RR37 186 aa9.05□□□□□ -0.96
APP-213ENST00000464867 ANKRD62A6NC57 917 aa9.05□□□□□ -0.96
APP-213ENST00000464867 E9PLN8 166 aa9.05□□□□□ -0.96
APP-213ENST00000464867 FOXN3O00409 490 aaPredicted RBP9.05□□□□□ -0.96
APP-213ENST00000464867 EEF2KO00418 725 aaKnown RBP9.05□□□□□ -0.96
APP-213ENST00000464867 PROM1O43490 865 aa9.05□□□□□ -0.96
APP-213ENST00000464867 USP1O94782 785 aa9.05□□□□□ -0.96
APP-213ENST00000464867 CDK14O94921 469 aa9.05□□□□□ -0.96
APP-213ENST00000464867 TSPAN12O95859 305 aa9.05□□□□□ -0.96
APP-213ENST00000464867 PDHA1P08559 390 aa9.05□□□□□ -0.96
APP-213ENST00000464867 KRT3P12035 628 aa9.05□□□□□ -0.96
APP-213ENST00000464867 GPD1P21695 349 aa9.05□□□□□ -0.96
APP-213ENST00000464867 CA4P22748 312 aa9.05□□□□□ -0.96
APP-213ENST00000464867 IL4RP24394 825 aa9.05□□□□□ -0.96
APP-213ENST00000464867 CD68P34810 354 aaPredicted RBP9.05□□□□□ -0.96
APP-213ENST00000464867 SPAM1P38567 509 aa9.05□□□□□ -0.96
APP-213ENST00000464867 SPINT3P49223 89 aa9.05□□□□□ -0.96
APP-213ENST00000464867 GTF2H3Q13889 308 aa9.05□□□□□ -0.96
APP-213ENST00000464867 RPE65Q16518 533 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms