RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 NOX1Q9Y5S8 564 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 GBF1Q92538 1859 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 UBA6A0AVT1 1052 aaPredicted RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 PSMD11O00231 422 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 MAN1A2O60476 641 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 VPS26AO75436 327 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 NDUFS3O75489 264 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 KCNK2O95069 426 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 MOCS2O96007 188 aaPredicted RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 F2P00734 622 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 IL6P05231 212 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 CAPN1P07384 714 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 ODC1P11926 461 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 CD36P16671 472 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 PFKLP17858 780 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 PRKACGP22612 351 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 TCEA1P23193 301 aaKnown RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 FMO4P31512 558 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 RPL9P32969 192 aaKnown RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 RCVRNP35243 200 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 BMPR1AP36894 532 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 CLK3P49761 638 aaKnown RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 CRYBB1P53674 252 aaPredicted RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 CSNK2BP67870 215 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 ZNF45Q02386 682 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 PRKCDQ05655 676 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 EN1Q05925 392 aaPredicted RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 SLC13A2Q13183 592 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 GBX1Q14549 363 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 MAD2L1BPQ15013 274 aaPredicted RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 TRIP4Q15650 581 aaPredicted RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 AP5B1Q2VPB7 878 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 FBXO48Q5FWF7 155 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 HABP4Q5JVS0 413 aaKnown RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 STEAP3Q658P3 488 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 CPZQ66K79 652 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 KDM4DQ6B0I6 523 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 LAIR1Q6GTX8 287 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 IL27RAQ6UWB1 636 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 SCD5Q86SK9 330 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 POC5Q8NA72 575 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 METTL6Q8TCB7 284 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 GTF3C2Q8WUA4 911 aaPredicted RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 DNAJB3Q8WWF6 145 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 ATL1Q8WXF7 558 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 PSMG2Q969U7 264 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 NCLNQ969V3 563 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 SLC39A13Q96H72 371 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 PDLIM5Q96HC4 596 aaKnown RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 PYURFQ96I23 114 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 ZFP42Q96MM3 310 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 PITX2Q99697 317 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 CPPED1Q9BRF8 314 aaPredicted RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 ITPAQ9BY32 194 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 POLR1EQ9GZS1 481 aaKnown RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 DCSTAMPQ9H295 470 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 ELP3Q9H9T3 547 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 ABCB10Q9NRK6 738 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 SLC25A37Q9NYZ2 338 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 CD274Q9NZQ7 290 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 CCDC59Q9P031 241 aaKnown RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 TRMT6Q9UJA5 497 aaKnown RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 NDRG4Q9ULP0 352 aaKnown RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 FAM50BQ9Y247 325 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 EIF3LQ9Y262 564 aaKnown RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 PKP3Q9Y446 797 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 CCL27Q9Y4X3 112 aa7.16□□□□□ -1.26
USP48-206ENST00000464577 TNPO3Q9Y5L0 923 aaKnown RBP7.16□□□□□ -1.26
USP48-206ENST00000464577 IGLV3-10A0A075B6K4 115 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 FAM172BPA6NC97 362 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 NCF1BA6NI72 391 aaPredicted RBP7.15□□□□□ -1.26
USP48-206ENST00000464577 NCF1CA8MVU1 366 aaPredicted RBP7.15□□□□□ -1.26
USP48-206ENST00000464577 CENPBD1B2RD01 187 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 E9PQ18 207 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 CA12O43570 354 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 MITFO75030 526 aaPredicted RBP7.15□□□□□ -1.26
USP48-206ENST00000464577 FAM20BO75063 409 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 SNX4O95219 450 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 SNAI1O95863 264 aaPredicted RBP7.15□□□□□ -1.26
USP48-206ENST00000464577 FADS2O95864 444 aaKnown RBP7.15□□□□□ -1.26
USP48-206ENST00000464577 DLGAP3O95886 979 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 SERPINA1P01009 418 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 NCF1P14598 390 aaPredicted RBP7.15□□□□□ -1.26
USP48-206ENST00000464577 PKMP14618 531 aaKnown RBP7.15□□□□□ -1.26
USP48-206ENST00000464577 FSHRP23945 695 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 PPP3CCP48454 512 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 GZMMP51124 257 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 CLCNKBP51801 687 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 NEK2P51955 445 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 IL2P60568 153 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 ADAM17P78536 824 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 VAC14Q08AM6 782 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 TRAF3Q13114 568 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 PTPRCAPQ14761 206 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 MAPKAPK3Q16644 382 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 PARP15Q460N3 678 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 C6orf183Q5T699 404 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 ALG1LQ6GMV1 187 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 TWF2Q6IBS0 349 aaKnown RBP7.15□□□□□ -1.26
USP48-206ENST00000464577 CES5AQ6NT32 575 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms