RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 LIMA1Q9UHB6 759 aaKnown RBP3.86□□□□□ -1.79
ITGB1-208ENST00000464001 PADI3Q9ULW8 664 aa3.86□□□□□ -1.79
ITGB1-208ENST00000464001 DUSP12Q9UNI6 340 aa3.86□□□□□ -1.79
ITGB1-208ENST00000464001 C2CD2Q9Y426 696 aa3.86□□□□□ -1.79
ITGB1-208ENST00000464001 TRIM17Q9Y577 477 aa3.86□□□□□ -1.79
ITGB1-208ENST00000464001 TRPV2Q9Y5S1 764 aa3.86□□□□□ -1.79
ITGB1-208ENST00000464001 PRSS21Q9Y6M0 314 aa3.86□□□□□ -1.79
ITGB1-208ENST00000464001 SYNJ2BP-COX16A0A087WUM0 186 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 TRAV34A0A0B4J273 112 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 hCG_1809904A0A1W2PP81 198 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 A0A1W2PPE2 198 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 A0A1W2PR64 198 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 RGSL1A5PLK6 1076 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 K7EPI3 171 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 SCAMP1O15126 338 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 PRPSAP2O60256 369 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 EIF2S1P05198 315 aaKnown RBP3.85□□□□□ -1.79
ITGB1-208ENST00000464001 TPOP07202 933 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 MYBL1P10243 752 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 EEF2P13639 858 aaKnown RBP3.85□□□□□ -1.79
ITGB1-208ENST00000464001 KRT13P13646 458 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 PTAFRP25105 342 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 MTHFRP42898 656 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 NRIP1P48552 1158 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 MLLT10P55197 1068 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 SHROOM1Q2M3G4 852 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-208ENST00000464001 COL28A1Q2UY09 1125 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 C2orf76Q3KRA6 126 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 PPP1R42Q7Z4L9 355 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 TRPT1Q86TN4 253 aaKnown RBP3.85□□□□□ -1.79
ITGB1-208ENST00000464001 DNAAF5Q86Y56 855 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 APLFQ8IW19 511 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-208ENST00000464001 MAPK1IP1LQ8NDC0 245 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 TRIM58Q8NG06 486 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 KIF18AQ8NI77 898 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 TMEM190Q8WZ59 177 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 ATP6V0A1Q93050 837 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 MR1Q95460 341 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 TRIM44Q96DX7 344 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-208ENST00000464001 CFAP53Q96M91 514 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 HARBI1Q96MB7 349 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 ZNF599Q96NL3 588 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 WDFY2Q96P53 400 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 PCGF1Q9BSM1 259 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 LRMDAQ9H2I8 198 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 KAT14Q9H8E8 782 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 FANCFQ9NPI8 374 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 SLC52A3Q9NQ40 469 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 MARCH4Q9P2E8 410 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-208ENST00000464001 CPSF2Q9P2I0 782 aaKnown RBP3.85□□□□□ -1.79
ITGB1-208ENST00000464001 CACNG4Q9UBN1 327 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 PTRH2Q9Y3E5 179 aaKnown RBP3.85□□□□□ -1.79
ITGB1-208ENST00000464001 POMT1Q9Y6A1 747 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 SMAD5-AS1Q9Y6J3 95 aa3.85□□□□□ -1.79
ITGB1-208ENST00000464001 ERICH4A6NGS2 130 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 BOLA2-SMG1P6H3BVE0 249 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 DNM1LO00429 736 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 NR5A2O00482 541 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 PSMD14O00487 310 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 KCNN4O15554 427 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 CIDEAO60543 219 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 GCNT3O95395 438 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 OLFM2O95897 454 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 IGLV1-44P01699 117 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 CCDC175P0C221 793 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 PRSS56P0CW18 603 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 ERVK-10P10266 1014 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 CSF2RAP15509 400 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 SAT1P21673 171 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 IL4RP24394 825 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 HOXC9P31274 260 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 CPOXP36551 454 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 PRPHP41219 470 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 TNNT2P45379 298 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-208ENST00000464001 GPC3P51654 580 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 TKTL1P51854 596 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 LUMP51884 338 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-208ENST00000464001 CDH8P55286 799 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 SLC26A5P58743 744 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 RPL7AP62424 266 aaKnown RBP3.84□□□□□ -1.79
ITGB1-208ENST00000464001 LRRC74AQ0VAA2 488 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 MAD2L1Q13257 205 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-208ENST00000464001 FGFBP1Q14512 234 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 CRYMQ14894 314 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 SMU1Q2TAY7 513 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 KBTBD12Q3ZCT8 623 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 TECRLQ5HYJ1 363 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 C9orf152Q5JTZ5 239 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 KRT80Q6KB66 452 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 NCEH1Q6PIU2 408 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 RAD9BQ6WBX8 426 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 CHST3Q7LGC8 479 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 NOTCH2NLQ7Z3S9 236 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 NRROSQ86YC3 692 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 WDR20Q8TBZ3 569 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 KCNE4Q8WWG9 221 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 MRPS27Q92552 414 aaKnown RBP3.84□□□□□ -1.79
ITGB1-208ENST00000464001 ARHGEF2Q92974 986 aaKnown RBP3.84□□□□□ -1.79
ITGB1-208ENST00000464001 ARHGEF26Q96DR7 871 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 PDLIM5Q96HC4 596 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms