RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 C11orf74Q86VG3 221 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 ANKRD46Q86W74 232 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 TERB1Q8NA31 727 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 ZNF597Q96LX8 424 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 TSSK3Q96PN8 268 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 COPS8Q99627 209 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 MCMBPQ9BTE3 642 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 EIF3LQ9Y262 564 aaKnown RBP15.12■□□□□ 0.01
LMNB1-203ENST00000460265 RALGAPA2Q2PPJ7 1873 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 HTRA2O43464 458 aaPredicted RBP15.12■□□□□ 0.01
LMNB1-203ENST00000460265 G6PDP11413 515 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 CCL5P13501 91 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 SLC26A3P40879 764 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 VEGFBP49765 207 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 CXorf57Q6NSI4 855 aaKnown RBP15.12■□□□□ 0.01
LMNB1-203ENST00000460265 Q6ZVU0 165 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 SNX29P2Q8IUI4 249 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 FUNDC1Q8IVP5 155 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 OR2T34Q8NGX1 318 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 OR2T3Q8NH03 318 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 ZNF420Q8TAQ5 688 aaPredicted RBP15.12■□□□□ 0.01
LMNB1-203ENST00000460265 SORCS1Q8WY21 1168 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 SDCCAG3Q96C92 435 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 MED8Q96G25 268 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 TUBB1Q9H4B7 451 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 ASAH2Q9NR71 780 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 IFT52Q9Y366 437 aa15.12■□□□□ 0.01
LMNB1-203ENST00000460265 FAM92AA1XBS5 289 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 KRT87PA6NCN2 255 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 IGLV3-27P01718 113 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 EPB42P16452 691 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 EFNA1P20827 205 aaPredicted RBP15.11■□□□□ 0.01
LMNB1-203ENST00000460265 ATP6V1B2P21281 511 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 NFATC3Q12968 1075 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 ABRQ12979 859 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 MAPK11Q15759 364 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 CHST15Q7LFX5 561 aaPredicted RBP15.11■□□□□ 0.01
LMNB1-203ENST00000460265 MMAAQ8IVH4 418 aaKnown RBP15.11■□□□□ 0.01
LMNB1-203ENST00000460265 ADGRG2Q8IZP9 1017 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 CLIP4Q8N3C7 705 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 CD200R1Q8TD46 325 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 SELENOMQ8WWX9 145 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 NSMCE2Q96MF7 247 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 ING2Q9H160 280 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 ALG2Q9H553 416 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 PDFQ9HBH1 243 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 WARS2Q9UGM6 360 aaKnown RBP15.11■□□□□ 0.01
LMNB1-203ENST00000460265 SLC25A13Q9UJS0 675 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 UPK3BL1B0FP48 263 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 UPK3BL2E5RIL1 263 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 SLC22A2O15244 555 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 C8BP07358 591 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 CCT8P50990 548 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 RAD23AP54725 363 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 RHDQ02161 417 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 LMAN2Q12907 356 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 PTGR1Q14914 329 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 GPNMBQ14956 572 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 RFLNAQ6ZTI6 216 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 TNIP2Q8NFZ5 429 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 OR10Q1Q8NGQ4 319 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 RHEBL1Q8TAI7 183 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 ACDQ96AP0 544 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 L3HYPDHQ96EM0 354 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 NPLQ9BXD5 320 aaPredicted RBP15.11■□□□□ 0.01
LMNB1-203ENST00000460265 KLF16Q9BXK1 252 aaPredicted RBP15.11■□□□□ 0.01
LMNB1-203ENST00000460265 MTG2Q9H4K7 406 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 MOSPD1Q9UJG1 213 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 ZNF490Q9ULM2 529 aaPredicted RBP15.11■□□□□ 0.01
LMNB1-203ENST00000460265 KPNA3O00505 521 aaPredicted RBP15.11■□□□□ 0.01
LMNB1-203ENST00000460265 INHBBP09529 407 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 LRP8Q14114 963 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 TPGS2Q68CL5 300 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 NCEH1Q6PIU2 408 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 TXNDC11Q6PKC3 985 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 GCNT7Q6ZNI0 430 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 KCTD8Q6ZWB6 473 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 TEX37Q96LM6 180 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 INTS7Q9NVH2 962 aaKnown RBP15.11■□□□□ 0.01
LMNB1-203ENST00000460265 HCFC1R1Q9NWW0 138 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 IL37Q9NZH6 218 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 IL17CQ9P0M4 197 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 LIMD1Q9UGP4 676 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 LEF1Q9UJU2 399 aaPredicted RBP15.11■□□□□ 0.01
LMNB1-203ENST00000460265 CNOT11Q9UKZ1 510 aaKnown RBP15.11■□□□□ 0.01
LMNB1-203ENST00000460265 MYOFQ9NZM1 2061 aa15.11■□□□□ 0.01
LMNB1-203ENST00000460265 ZSWIM8A7E2V4 1837 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 NME4O00746 187 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 RFPL2O75678 378 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 GNAO1P09471 354 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 RPIAP49247 311 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 ERVPABLB-1P60509 514 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 PLCL1Q15111 1095 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 C6orf136Q5SQH8 315 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 SUN5Q8TC36 379 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 CYB5D2Q8WUJ1 264 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 SCAMP4Q969E2 229 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 FAM162AQ96A26 154 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 ADNPQ9H2P0 1102 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms