RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 GOLGA6L19H0YKK7 550 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 IFRD1O00458 451 aaPredicted RBP10.09□□□□□ -0.79
HDLBP-227ENST00000458564 DDX3YO15523 660 aaKnown RBP10.09□□□□□ -0.79
HDLBP-227ENST00000458564 IPO13O94829 963 aaKnown RBP10.09□□□□□ -0.79
HDLBP-227ENST00000458564 AGTP01019 485 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 GSTM1P09488 218 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 ITGALP20701 1170 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 OTX2P32243 289 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 GABRA4P48169 554 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 HADHBP55084 474 aaKnown RBP10.09□□□□□ -0.79
HDLBP-227ENST00000458564 GSTM4Q03013 218 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 RAPSNQ13702 412 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 BOP1Q14137 746 aaKnown RBP10.09□□□□□ -0.79
HDLBP-227ENST00000458564 GPR33Q49SQ1 333 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 LYPLAL1Q5VWZ2 237 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 KAZNQ674X7 775 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 ITPRIPL1Q6GPH6 555 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 SPESP1Q6UW49 350 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 Q6ZS92 163 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 SNX20Q7Z614 316 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 KATNAL2Q8IYT4 538 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 GALNT16Q8N428 558 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 C19orf47Q8N9M1 422 aaKnown RBP10.09□□□□□ -0.79
HDLBP-227ENST00000458564 OR2Y1Q8NGV0 311 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 TM9SF4Q92544 642 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 INPP5DQ92835 1189 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.09□□□□□ -0.79
HDLBP-227ENST00000458564 NACC2Q96BF6 587 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 RBM41Q96IZ5 413 aaKnown RBP10.09□□□□□ -0.79
HDLBP-227ENST00000458564 GBP5Q96PP8 586 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 FERD3LQ96RJ6 166 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 FICDQ9BVA6 458 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 ZNF552Q9H707 407 aaPredicted RBP10.09□□□□□ -0.79
HDLBP-227ENST00000458564 ABHD10Q9NUJ1 306 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 SPTLC3Q9NUV7 552 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 ZNHIT6Q9NWK9 470 aaKnown RBP10.09□□□□□ -0.79
HDLBP-227ENST00000458564 ACTR10Q9NZ32 417 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 MAP10Q9P2G4 905 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 SRPK3Q9UPE1 567 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 HYOU1Q9Y4L1 999 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 PCDHGA10Q9Y5H3 936 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 FER1L5A0AVI2 2057 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 PCM1Q15154 2024 aa10.09□□□□□ -0.79
HDLBP-227ENST00000458564 TEP1Q99973 2627 aaKnown RBP10.08□□□□□ -0.8
HDLBP-227ENST00000458564 PIKFYVEQ9Y2I7 2098 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 SYCE3A1L190 88 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 H7C0S8 307 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 APOC4-APOC2K7ER74 178 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 PEX12O00623 359 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 ZSCAN9O15535 394 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-227ENST00000458564 ZRANB2O95218 330 aaKnown RBP eCLIP10.08□□□□□ -0.8
HDLBP-227ENST00000458564 CRTAMO95727 393 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 APOC2P02655 101 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 TNNT1P13805 278 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 PVRP15151 417 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 COL8A1P27658 744 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 FOLR3P41439 243 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 KYNUQ16719 465 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 MRPL14Q6P1L8 145 aaKnown RBP10.08□□□□□ -0.8
HDLBP-227ENST00000458564 BBS12Q6ZW61 710 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 KLHDC8BQ8IXV7 354 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 CISD2Q8N5K1 135 aaKnown RBP10.08□□□□□ -0.8
HDLBP-227ENST00000458564 OR13C4Q8NGS5 318 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 UBE2Q2Q8WVN8 375 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 CCDC42Q96M95 316 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 RANBP9Q96S59 729 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 CHP1Q99653 195 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 HGH1Q9BTY7 390 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 AP1M1Q9BXS5 423 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 ILKAPQ9H0C8 392 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-227ENST00000458564 NHEJ1Q9H9Q4 299 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-227ENST00000458564 ARNT2Q9HBZ2 717 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 FAM60AQ9NP50 221 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 P4HTMQ9NXG6 502 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 ZDHHC3Q9NYG2 299 aa10.08□□□□□ -0.8
HDLBP-227ENST00000458564 FEZ2Q9UHY8 353 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-227ENST00000458564 AAR2Q9Y312 384 aaKnown RBP10.08□□□□□ -0.8
HDLBP-227ENST00000458564 PTRH2Q9Y3E5 179 aaKnown RBP10.08□□□□□ -0.8
HDLBP-227ENST00000458564 LDB2O43679 373 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 MFAP3LO75121 409 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 CNOT3O75175 753 aaKnown RBP10.07□□□□□ -0.8
HDLBP-227ENST00000458564 OR2B3O76000 313 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 CBSLP0DN79 551 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 UGT2B7P16662 529 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 ACRV1P26436 265 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 RBL1P28749 1068 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 PDHA2P29803 388 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 SHMT2P34897 504 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 CBSP35520 551 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 DCDP81605 110 aaKnown RBP10.07□□□□□ -0.8
HDLBP-227ENST00000458564 LLGL1Q15334 1064 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 ZIC1Q15915 447 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 DENND5AQ6IQ26 1287 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 ZNF449Q6P9G9 518 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 PPP1R32Q7Z5V6 425 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 RCOR2Q8IZ40 523 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 TTC13Q8NBP0 860 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 ST6GALNAC3Q8NDV1 305 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 FLVCR1-AS1Q8TAF5 88 aa10.07□□□□□ -0.8
HDLBP-227ENST00000458564 COG1Q8WTW3 980 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms