RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PHF21BQ96EK2 531 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 HIST1H2AHQ96KK5 128 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 RILPQ96NA2 401 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 TMEM237Q96Q45 408 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 SORT1Q99523 831 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 SLC30A3Q99726 388 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 HIST1H2AJQ99878 128 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 CCM2Q9BSQ5 444 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 H2AFJQ9BTM1 129 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 C1QTNF3Q9BXJ4 246 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 TRIM39Q9HCM9 518 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 CYP4F12Q9HCS2 524 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 PHPT1Q9NRX4 125 aaPredicted RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 MARCOQ9UEW3 520 aaPredicted RBP8.77□□□□□ -1.01
VPS50-207ENST00000458530 GPR34Q9UPC5 381 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 TRIM33Q9UPN9 1127 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 COQ6Q9Y2Z9 468 aa8.77□□□□□ -1.01
VPS50-207ENST00000458530 C17orf113A0A1B0GUU1 675 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 A0A1W2PQF6 199 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 NEMP2A6NFY4 417 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 IGLON5A6NGN9 336 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 LRRC72A6NJI9 287 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 INPP4BO15327 924 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 FFAR2O15552 330 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 ITM2AO43736 263 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 ADAM23O75077 832 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 CRCPO75575 148 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 CHEK2O96017 543 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 CATP04040 527 aaKnown RBP8.76□□□□□ -1.01
VPS50-207ENST00000458530 PCCBP05166 539 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 RPS17P08708 135 aaKnown RBP8.76□□□□□ -1.01
VPS50-207ENST00000458530 ANXA5P08758 320 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 MAP4P27816 1152 aaKnown RBP8.76□□□□□ -1.01
VPS50-207ENST00000458530 EEF1DP29692 281 aaKnown RBP8.76□□□□□ -1.01
VPS50-207ENST00000458530 CCR7P32248 378 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 HNMTP50135 292 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 RASSF2P50749 326 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 DGKEP52429 567 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 ADPRHP54922 357 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 HSPA14Q0VDF9 509 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 CDC16Q13042 620 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 LCP2Q13094 533 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 CCINQ13939 588 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 GBX1Q14549 363 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 ACSBG2Q5FVE4 666 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 KIAA1211LQ6NV74 962 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 PNCKQ6P2M8 343 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 NAPRTQ6XQN6 538 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 HORMAD1Q86X24 394 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 TRAPPC5Q8IUR0 188 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 RASGEF1AQ8N9B8 481 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 DENND6BQ8NEG7 585 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 OR56A4Q8NGH8 313 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 RFWD2Q8NHY2 731 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 HM13Q8TCT9 377 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 LKAAEAR1Q8TD35 194 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 MCOLN3Q8TDD5 553 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 UBTD2Q8WUN7 234 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 SKA2Q8WVK7 121 aaPredicted RBP8.76□□□□□ -1.01
VPS50-207ENST00000458530 THOC1Q96FV9 657 aaKnown RBP8.76□□□□□ -1.01
VPS50-207ENST00000458530 ZC3H10Q96K80 434 aaKnown RBP8.76□□□□□ -1.01
VPS50-207ENST00000458530 LINC00615Q96LM1 132 aaPredicted RBP8.76□□□□□ -1.01
VPS50-207ENST00000458530 EGFL8Q99944 293 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 WDR26Q9H7D7 661 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 RMI1Q9H9A7 625 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 SGK2Q9HBY8 427 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 TXLNGQ9NUQ3 528 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 WWOXQ9NZC7 414 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 GALPQ9UBC7 116 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 ZFP69BQ9UJL9 534 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 TMPRSS11EQ9UL52 423 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 PCDHGA5Q9Y5G8 931 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 DNMT3AQ9Y6K1 912 aaPredicted RBP8.76□□□□□ -1.01
VPS50-207ENST00000458530 DOCK9Q9BZ29 2069 aa8.76□□□□□ -1.01
VPS50-207ENST00000458530 LAMA1P25391 3075 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 NBEAQ8NFP9 2946 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 TCRBV21S2A2A0A5A6 115 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 OR2AG2A6NM03 316 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 MATN2O00339 956 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 DIAPH2O60879 1101 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 RNGTTO60942 597 aaKnown RBP8.75□□□□□ -1.01
VPS50-207ENST00000458530 MTX2O75431 263 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 GPC4O75487 556 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 SLCO2B1O94956 709 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 SOD1P00441 154 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 RPN2P04844 631 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 MTHFD2P13995 350 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 EZRP15311 586 aaKnown RBP8.75□□□□□ -1.01
VPS50-207ENST00000458530 MPSTP25325 297 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 CA5AP35218 305 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 NUDT1P36639 197 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 PKNOX1P55347 436 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 TAS2R38P59533 333 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 IRX1P78414 480 aaPredicted RBP8.75□□□□□ -1.01
VPS50-207ENST00000458530 CDK3Q00526 305 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 CLCQ05315 142 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 SF3A3Q12874 501 aaKnown RBP eCLIP8.75□□□□□ -1.01
VPS50-207ENST00000458530 RPA4Q13156 261 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 PCBP2Q15366 365 aaKnown RBP eCLIP8.75□□□□□ -1.01
VPS50-207ENST00000458530 RBBP7Q16576 425 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms