RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 GPR83Q9NYM4 423 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 PLEKHB1Q9UF11 243 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-220ENST00000458038 PCDHA3Q9Y5H8 950 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 PCDHA13Q9Y5I0 950 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 AP1M2Q9Y6Q5 423 aa20.87■□□□□ 0.93
CPNE1-220ENST00000458038 H7C0S8 307 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 QSOX1O00391 747 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 BTN3A3O00478 584 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 BTN3A1O00481 513 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 ZNF185O15231 689 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 AP2A2O94973 939 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 ACRV1P26436 265 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 CTNNA1P35221 906 aaKnown RBP20.86■□□□□ 0.93
CPNE1-220ENST00000458038 EIF3EP60228 445 aaKnown RBP20.86■□□□□ 0.93
CPNE1-220ENST00000458038 ZNF658BQ4V348 819 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-220ENST00000458038 DENND5AQ6IQ26 1287 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 DARS2Q6PI48 645 aaKnown RBP20.86■□□□□ 0.93
CPNE1-220ENST00000458038 ZBTB2Q8N680 514 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 NAT14Q8WUY8 206 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 TFGQ92734 400 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-220ENST00000458038 N4BP2L2Q92802 583 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-220ENST00000458038 SGSM3Q96HU1 749 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 SMAD5Q99717 465 aaKnown RBP20.86■□□□□ 0.93
CPNE1-220ENST00000458038 OSBPL8Q9BZF1 889 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 C10orf88Q9H8K7 445 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 CCDC88CQ9P219 2028 aa20.86■□□□□ 0.93
CPNE1-220ENST00000458038 KCNN4O15554 427 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 PJA2O43164 708 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 ZNF749O43361 778 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 LDB2O43679 373 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 DDAH2O95865 285 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 MC4RP32245 332 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 BOP1Q14137 746 aaKnown RBP20.85■□□□□ 0.93
CPNE1-220ENST00000458038 KLHDC8BQ8IXV7 354 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 ADGRF3Q8IZF5 1079 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 TCTN2Q96GX1 697 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 NUDT9Q9BW91 350 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 FAM96AQ9H5X1 160 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 ACTR10Q9NZ32 417 aa20.85■□□□□ 0.93
CPNE1-220ENST00000458038 ITPR2Q14571 2701 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 DOPEY1Q5JWR5 2465 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 MACROD2A1Z1Q3 448 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 LIN7AO14910 233 aaPredicted RBP20.84■□□□□ 0.93
CPNE1-220ENST00000458038 TJP3O95049 919 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 CYLC1P35663 651 aaPredicted RBP20.84■□□□□ 0.93
CPNE1-220ENST00000458038 LMAN1P49257 510 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 TMPRSS15P98073 1019 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 OLIG2Q13516 323 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 SSPNQ14714 243 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 PTCHD3Q3KNS1 767 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 ZRANB3Q5FWF4 1079 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 VWA5B1Q5TIE3 1220 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 SPESP1Q6UW49 350 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 SERPINA9Q86WD7 417 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 PHC3Q8NDX5 983 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 FER1L6-AS2Q96M78 137 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 NLE1Q9NVX2 485 aaPredicted RBP20.84■□□□□ 0.93
CPNE1-220ENST00000458038 POLG2Q9UHN1 485 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 FER1L5A0AVI2 2057 aa20.84■□□□□ 0.93
CPNE1-220ENST00000458038 PDHA2P29803 388 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 SHMT2P34897 504 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 PLOD1Q02809 727 aaPredicted RBP20.83■□□□□ 0.93
CPNE1-220ENST00000458038 ATP1A4Q13733 1029 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 ZNF385CQ66K41 422 aaPredicted RBP20.83■□□□□ 0.93
CPNE1-220ENST00000458038 SLC6A19Q695T7 634 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 CDHR3Q6ZTQ4 885 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 TAS2R42Q7RTR8 314 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 TMTC1Q8IUR5 882 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 LURAP1LQ8IV03 231 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 TC2NQ8N9U0 490 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 CCDC110Q8TBZ0 833 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 PROKR1Q8TCW9 393 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 STYXQ8WUJ0 223 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 TSPY26PQ9H489 355 aa20.83■□□□□ 0.93
CPNE1-220ENST00000458038 GPN3Q9UHW5 284 aaPredicted RBP20.83■□□□□ 0.93
CPNE1-220ENST00000458038 MYO9AB2RTY4 2548 aa20.83■□□□□ 0.92
CPNE1-220ENST00000458038 CNTRLQ7Z7A1 2325 aa20.83■□□□□ 0.92
CPNE1-220ENST00000458038 CREBBPQ92793 2442 aa20.83■□□□□ 0.92
CPNE1-220ENST00000458038 A6NL46 340 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 DDX3YO15523 660 aaKnown RBP20.82■□□□□ 0.92
CPNE1-220ENST00000458038 KDM1AO60341 852 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 KLF7O75840 302 aaPredicted RBP20.82■□□□□ 0.92
CPNE1-220ENST00000458038 ALPPP05187 535 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 RWDD2BP57060 319 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 CACNG1Q06432 222 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 PRKG2Q13237 762 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 PARP6Q2NL67 630 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 RHBDD2Q6NTF9 364 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 TBC1D21Q8IYX1 336 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 RBMXL3Q8N7X1 1067 aaKnown RBP20.82■□□□□ 0.92
CPNE1-220ENST00000458038 C19orf47Q8N9M1 422 aaKnown RBP20.82■□□□□ 0.92
CPNE1-220ENST00000458038 Q8NA96 180 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 CLEC1AQ8NC01 280 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 DNAJC1Q96KC8 554 aaKnown RBP20.82■□□□□ 0.92
CPNE1-220ENST00000458038 ALS2CR12Q96Q35 445 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 HGH1Q9BTY7 390 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 OR6C2Q9NZP2 312 aa20.82■□□□□ 0.92
CPNE1-220ENST00000458038 TCP11X1B4DZS4 312 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 F8W8V4 182 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 PEX12O00623 359 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms