RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SKIV2L2P42285 1042 aaKnown RBP12.71□□□□□ -0.37
VPS33A-202ENST00000451053 FASLGP48023 281 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 DUSP3P51452 185 aaPredicted RBP12.71□□□□□ -0.37
VPS33A-202ENST00000451053 NOVA1P51513 510 aaKnown RBP12.71□□□□□ -0.37
VPS33A-202ENST00000451053 ABRQ12979 859 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 PDAP1Q13442 181 aaKnown RBP12.71□□□□□ -0.37
VPS33A-202ENST00000451053 USP10Q14694 798 aaKnown RBP12.71□□□□□ -0.37
VPS33A-202ENST00000451053 TTLL9Q3SXZ7 439 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 TTMPQ5BVD1 217 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 UGT3A1Q6NUS8 523 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 TMEM207Q6UWW9 146 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 GLRX5Q86SX6 157 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
VPS33A-202ENST00000451053 PHC3Q8NDX5 983 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 IFI44Q8TCB0 444 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 SKA2Q8WVK7 121 aaPredicted RBP12.71□□□□□ -0.37
VPS33A-202ENST00000451053 TFGQ92734 400 aaPredicted RBP12.71□□□□□ -0.37
VPS33A-202ENST00000451053 ISL2Q96A47 359 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 SSU72Q9NP77 194 aaKnown RBP12.71□□□□□ -0.37
VPS33A-202ENST00000451053 POT1Q9NUX5 634 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 TOR4AQ9NXH8 423 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 ZNF292O60281 2723 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 PTPRZ1P23471 2315 aaPredicted RBP12.7□□□□□ -0.38
VPS33A-202ENST00000451053 DCDC2BA2VCK2 349 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 RHPN2P1A8MT19 583 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 CASC3O15234 703 aaKnown RBP12.7□□□□□ -0.38
VPS33A-202ENST00000451053 PHGDHO43175 533 aaKnown RBP12.7□□□□□ -0.38
VPS33A-202ENST00000451053 KCNK5O95279 499 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 TSPAN12O95859 305 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 MPOP05164 745 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 CEACAM1P13688 526 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 GLB1P16278 677 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 SDHBP21912 280 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 CRABP2P29373 138 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 TYK2P29597 1187 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 MAGOHP61326 146 aaKnown RBP12.7□□□□□ -0.38
VPS33A-202ENST00000451053 BIRC2Q13490 618 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 TAF1BQ53T94 588 aaPredicted RBP12.7□□□□□ -0.38
VPS33A-202ENST00000451053 CCDC157Q569K6 752 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 PIWIL4Q7Z3Z4 852 aaKnown RBP12.7□□□□□ -0.38
VPS33A-202ENST00000451053 ZNF438Q7Z4V0 828 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 CMC1Q7Z7K0 106 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 EXOC3L1Q86VI1 746 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 LCA5Q86VQ0 697 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 ARFGAP2Q8N6H7 521 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 Q8N9G6 341 aaPredicted RBP12.7□□□□□ -0.38
VPS33A-202ENST00000451053 AVL9Q8NBF6 648 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 OR5AR1Q8NGP9 310 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 CFAP61Q8NHU2 1237 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 EEF1AKMT1Q8WVE0 214 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 JPH3Q8WXH2 748 aaPredicted RBP12.7□□□□□ -0.38
VPS33A-202ENST00000451053 NAT6Q93015 286 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 ZBTB9Q96C00 473 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 LINGO1Q96FE5 620 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 FERD3LQ96RJ6 166 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 HGH1Q9BTY7 390 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 STN1Q9H668 368 aaKnown RBP12.7□□□□□ -0.38
VPS33A-202ENST00000451053 POPDC3Q9HBV1 291 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 SLC40A1Q9NP59 571 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 SNX15Q9NRS6 342 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 EVA1BQ9NVM1 165 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 DLL3Q9NYJ7 618 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 TLK1Q9UKI8 766 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 ASF1AQ9Y294 204 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 HEBP2Q9Y5Z4 205 aa12.7□□□□□ -0.38
VPS33A-202ENST00000451053 H3BQF6 201 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 EIF3FO00303 357 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-202ENST00000451053 RFPL1O75677 317 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 WISP3O95389 354 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-202ENST00000451053 ALDOAP04075 364 aaKnown RBP12.69□□□□□ -0.38
VPS33A-202ENST00000451053 MPC1LP0DKB6 136 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 CBSLP0DN79 551 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 ENO3P13929 434 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-202ENST00000451053 ZNF37AP17032 561 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-202ENST00000451053 KRT4P19013 534 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 CBSP35520 551 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 GMPRP36959 345 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 MAGEA12P43365 314 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 BDKRB1P46663 353 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 OR1D5P58170 312 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 RAB10P61026 200 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 SIM1P81133 766 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-202ENST00000451053 GPR18Q14330 331 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 KRT33BQ14525 404 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 NR1D2Q14995 579 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 ZKSCAN8Q15776 578 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-202ENST00000451053 UNC5DQ6UXZ4 953 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 CYHR1Q6ZMK1 362 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 TMEM26Q6ZUK4 368 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 NEK10Q6ZWH5 1172 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 RAPH1Q70E73 1250 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 SLCO6A1Q86UG4 719 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 OR6C4Q8NGE1 309 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 ANKRD49Q8WVL7 239 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 TSNARE1Q96NA8 513 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 NRTNQ99748 197 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 CCDC3Q9BQI4 270 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 TBC1D10AQ9BXI6 508 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 IQCGQ9H095 443 aaKnown RBP12.69□□□□□ -0.38
VPS33A-202ENST00000451053 MVB12BQ9H7P6 319 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms