RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CPA6Q8N4T0 437 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 FAM86B1Q8N7N1 296 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 C2orf69Q8N8R5 385 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 ZNF511Q8NB15 262 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 MCPH1Q8NEM0 835 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 OR7D4Q8NG98 312 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 IL31RAQ8NI17 732 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 TSPEARQ8WU66 669 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 FBXW5Q969U6 566 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 PHF21BQ96EK2 531 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 LPIN3Q9BQK8 851 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 TRMOQ9BU70 441 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 SPATA9Q9BWV2 254 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 TTLL2Q9BWV7 592 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 POLR3FQ9H1D9 316 aaPredicted RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 GSTO2Q9H4Y5 243 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 RNF167Q9H6Y7 350 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 INTS7Q9NVH2 962 aaKnown RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 TMLHEQ9NVH6 421 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 SLAMF8Q9P0V8 285 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 EVLQ9UI08 416 aaPredicted RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 GMEB2Q9UKD1 530 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 TLR6Q9Y2C9 796 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 MRPL11Q9Y3B7 192 aaKnown RBP8.47□□□□□ -1.05
LSM5-208ENST00000450169 ZNF175Q9Y473 711 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 PTGDR2Q9Y5Y4 395 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 HSPE1-MOB4S4R3N1 261 aa8.47□□□□□ -1.05
LSM5-208ENST00000450169 A0A087X1B8 175 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 A0A1W2PQ09 198 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 B4DXG7 233 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 DFFAO00273 331 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 TNFRSF10BO14763 440 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 RGS5O15539 181 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 TSC22D2O75157 780 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 EEDO75530 441 aaKnown RBP8.46□□□□□ -1.05
LSM5-208ENST00000450169 RECQL5O94762 991 aaPredicted RBP8.46□□□□□ -1.05
LSM5-208ENST00000450169 TP53P04637 393 aaPredicted RBP8.46□□□□□ -1.05
LSM5-208ENST00000450169 SUPT20HL2P0C7V6 817 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 CYP2C8P10632 490 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 CYP4B1P13584 511 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 HLA-DMAP28067 261 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 TNFSF8P32971 234 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 DCTP40126 519 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 CPT1AP50416 773 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 SCNN1GP51170 649 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 JAK3P52333 1124 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 EMX2Q04743 252 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 RIN1Q13671 783 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 TAB1Q15750 504 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 UGP2Q16851 508 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 TIGD6Q17RP2 521 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 LEXMQ3ZCV2 418 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 SOWAHCQ53LP3 525 aaPredicted RBP8.46□□□□□ -1.05
LSM5-208ENST00000450169 TECRLQ5HYJ1 363 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 PAMR1Q6UXH9 720 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 TMEM179Q6ZVK1 233 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 NIPA1Q7RTP0 329 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 GALNT5Q7Z7M9 940 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 MFSD6LQ8IWD5 586 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 RDH10Q8IZV5 341 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 OR8H3Q8N146 312 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 ZBTB44Q8NCP5 570 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 OR5K1Q8NHB7 308 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 VANGL1Q8TAA9 524 aaPredicted RBP8.46□□□□□ -1.05
LSM5-208ENST00000450169 IPCEF1Q8WWN9 437 aaPredicted RBP8.46□□□□□ -1.05
LSM5-208ENST00000450169 PTERQ96BW5 349 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 CYP2S1Q96SQ9 504 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 KCNS3Q9BQ31 491 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 RNF121Q9H920 327 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 CARS2Q9HA77 564 aaKnown RBP8.46□□□□□ -1.05
LSM5-208ENST00000450169 CYP3A43Q9HB55 503 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 MCCC2Q9HCC0 563 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 DYRK4Q9NR20 520 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 MRPL39Q9NYK5 338 aaKnown RBP8.46□□□□□ -1.05
LSM5-208ENST00000450169 COL20A1Q9P218 1284 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.46□□□□□ -1.05
LSM5-208ENST00000450169 FBXO40Q9UH90 709 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 LRFN2Q9ULH4 789 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 DNAJC15Q9Y5T4 150 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 SIPA1L1O43166 1804 aa8.46□□□□□ -1.05
LSM5-208ENST00000450169 LTBP1Q14766 1721 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 A0A1W2PRG6 482 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 M0R082 166 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 PIP5K1BO14986 540 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 MFSD11O43934 449 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 MITFO75030 526 aaPredicted RBP8.46□□□□□ -1.06
LSM5-208ENST00000450169 TRIM3O75382 744 aaPredicted RBP8.46□□□□□ -1.06
LSM5-208ENST00000450169 PPM1BO75688 479 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 AP2A1O95782 977 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 C1RP00736 705 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 TNNC2P02585 160 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 HGFP14210 728 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 IGFBP5P24593 272 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 NMBRP28336 390 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 GRK5P34947 590 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 HMGCLP35914 325 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 GLUD2P49448 558 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 SLC12A2P55011 1212 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 PTPN11Q06124 597 aaPredicted RBP8.46□□□□□ -1.06
LSM5-208ENST00000450169 BAMBIQ13145 260 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms