RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SERPINB5P36952 375 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 HNMTP50135 292 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 HERVK_113P63132 956 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 GNGT1P63211 74 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 ABRQ12979 859 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 CHI3L2Q15782 390 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 PFKFB4Q16877 469 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 ATG16L1Q676U5 607 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 TTC19Q6DKK2 380 aaPredicted RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 SULT1C3Q6IMI6 304 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 RD3Q7Z3Z2 195 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 SPDYE1Q8NFV5 336 aaPredicted RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 OR5K2Q8NHB8 316 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 MAGEC3Q8TD91 643 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 TFGQ92734 400 aaPredicted RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 RHBDF1Q96CC6 855 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 TMEM237Q96Q45 408 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 GATA5Q9BWX5 397 aaPredicted RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 ERVK-6Q9BXR3 956 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 GSDMCQ9BYG8 508 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 OSGEPL1Q9H4B0 414 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 NCKIPSDQ9NZQ3 722 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 WDR37Q9Y2I8 494 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 MYO1CO00159 1063 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 SNUPNO95149 360 aaKnown RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 RPN2P04844 631 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 ANXA5P08758 320 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 HIST1H2AGP0C0S8 130 aaPredicted RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 HIST1H2ADP20671 130 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 GGT5P36269 586 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 CSNK1EP49674 416 aaKnown RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 ZNF678Q5SXM1 525 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 CES4AQ5XG92 561 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 TTC23LQ6PF05 361 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 SYT12Q8IV01 421 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 TCAIMQ8N3R3 496 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 SDR16C5Q8N3Y7 309 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 PTGR2Q8N8N7 351 aaPredicted RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 HIST1H2AHQ96KK5 128 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 HIST1H2AJQ99878 128 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 H2AFJQ9BTM1 129 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 LRRC61Q9BV99 259 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 WWP1Q9H0M0 922 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 TCEAL2Q9H3H9 227 aaPredicted RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 UTP6Q9NYH9 597 aaKnown RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 CD274Q9NZQ7 290 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 TBC1D29Q9UFV1 150 aa18.79■□□□□ 0.6
RPS28-202ENST00000449223 APOBEC3BQ9UH17 382 aaKnown RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 TNPO3Q9Y5L0 923 aaKnown RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 TMEM114B3SHH9 223 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 NPHS1O60500 1241 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 SNX2O60749 519 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 RPS17P08708 135 aaKnown RBP18.78■□□□□ 0.6
RPS28-202ENST00000449223 JUNDP17535 347 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 AK4P27144 223 aaPredicted RBP18.78■□□□□ 0.6
RPS28-202ENST00000449223 RPL10P27635 214 aaKnown RBP18.78■□□□□ 0.6
RPS28-202ENST00000449223 MAP4P27816 1152 aaKnown RBP18.78■□□□□ 0.6
RPS28-202ENST00000449223 ACTR1BP42025 376 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 NAGLUP54802 743 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 C21orf59P57076 290 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 ACTR1AP61163 376 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 GALNT1Q10472 559 aaPredicted RBP18.78■□□□□ 0.6
RPS28-202ENST00000449223 BST1Q10588 318 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 PCBP2Q15366 365 aaKnown RBP eCLIP18.78■□□□□ 0.6
RPS28-202ENST00000449223 CEP68Q76N32 757 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 RABEPKQ7Z6M1 372 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 DCUN1D3Q8IWE4 304 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 TBC1D21Q8IYX1 336 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 CCL4L1Q8NHW4 92 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 EXT2Q93063 718 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 PHF21BQ96EK2 531 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 CCDC138Q96M89 665 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 TRMOQ9BU70 441 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 COL25A1Q9BXS0 654 aaPredicted RBP18.78■□□□□ 0.6
RPS28-202ENST00000449223 TMEM74BQ9NUR3 256 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 DNAJC28Q9NX36 388 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 ARL15Q9NXU5 204 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 PSMD13Q9UNM6 376 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 ASF1AQ9Y294 204 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 ARHGEF17Q96PE2 2063 aaPredicted RBP18.78■□□□□ 0.6
RPS28-202ENST00000449223 PI4KAP42356 2102 aa18.78■□□□□ 0.6
RPS28-202ENST00000449223 FAM86C2PA6NEL3 165 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 S100BP04271 92 aaPredicted RBP18.77■□□□□ 0.6
RPS28-202ENST00000449223 NEFHP12036 1026 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 F3P13726 295 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 CTSKP43235 329 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 HNRNPKP61978 463 aaKnown RBP eCLIP18.77■□□□□ 0.6
RPS28-202ENST00000449223 OCRLQ01968 901 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 CLCA4Q14CN2 919 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 ZCCHC23Q6ZST2 131 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 RAB44Q7Z6P3 723 aaPredicted RBP18.77■□□□□ 0.6
RPS28-202ENST00000449223 FBXL8Q96CD0 374 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 C7orf26Q96N11 449 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 INSM2Q96T92 566 aaPredicted RBP18.77■□□□□ 0.6
RPS28-202ENST00000449223 DRC3Q9H069 523 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 PRDM8Q9NQV8 689 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 THAP1Q9NVV9 213 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 PSD3Q9NYI0 1048 aa18.77■□□□□ 0.6
RPS28-202ENST00000449223 HEBP2Q9Y5Z4 205 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms