RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 COPG2Q9UBF2 871 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 ITGB1BP2Q9UKP3 347 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 BZW2Q9Y6E2 419 aaKnown RBP14.32□□□□□ -0.12
HDAC8-213ENST00000436675 MTORP42345 2549 aa14.32□□□□□ -0.12
HDAC8-213ENST00000436675 CCDC78A2IDD5 438 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 C3orf70A6NLC5 250 aaPredicted RBP14.31□□□□□ -0.12
HDAC8-213ENST00000436675 C2orf74A8MZ97 194 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 SGTAO43765 313 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 UMODP07911 640 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 MSL3P1P0C860 447 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 TNNT1P13805 278 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 EDN3P14138 238 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 DCDP81605 110 aaKnown RBP14.31□□□□□ -0.12
HDAC8-213ENST00000436675 OR52E1Q8NGJ3 308 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 FAR1Q8WVX9 515 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 RNF25Q96BH1 459 aaPredicted RBP14.31□□□□□ -0.12
HDAC8-213ENST00000436675 DCUN1D1Q96GG9 259 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 OXNAD1Q96HP4 312 aaPredicted RBP14.31□□□□□ -0.12
HDAC8-213ENST00000436675 MRGPRX2Q96LB1 330 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 C17orf62Q9BQA9 187 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 CCM2Q9BSQ5 444 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 PACSIN1Q9BY11 444 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 FAM96AQ9H5X1 160 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 SLC6A20Q9NP91 592 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 TXLNGQ9NUQ3 528 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 SMOXQ9NWM0 555 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 HACD3Q9P035 362 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 FKBPLQ9UIM3 349 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 FBXL4Q9UKA2 621 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 ARL5AQ9Y689 179 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 ZFHX3Q15911 3703 aa14.31□□□□□ -0.12
HDAC8-213ENST00000436675 A0A1B0GTH6 734 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 AGPSO00116 658 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 KRT1P04264 644 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 SOX8P57073 446 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 TYRO3Q06418 890 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 AIMP2Q13155 320 aaKnown RBP14.3□□□□□ -0.12
HDAC8-213ENST00000436675 ZNF169Q14929 603 aaPredicted RBP14.3□□□□□ -0.12
HDAC8-213ENST00000436675 SLC1A5Q15758 541 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 ZIC1Q15915 447 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 ZXDCQ2QGD7 858 aaPredicted RBP14.3□□□□□ -0.12
HDAC8-213ENST00000436675 NKAIN1Q4KMZ8 207 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 BCL7AQ4VC05 210 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 RHBDD2Q6NTF9 364 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 AMIGO1Q86WK6 493 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 PARP9Q8IXQ6 854 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 ADGRF3Q8IZF5 1079 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 C19orf47Q8N9M1 422 aaKnown RBP14.3□□□□□ -0.12
HDAC8-213ENST00000436675 OR4K2Q8NGD2 314 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 HM13Q8TCT9 377 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 PPP4R1Q8TF05 950 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 RUBCNLQ9H714 662 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 KLHL8Q9P2G9 620 aaPredicted RBP14.3□□□□□ -0.12
HDAC8-213ENST00000436675 AP1M2Q9Y6Q5 423 aa14.3□□□□□ -0.12
HDAC8-213ENST00000436675 A0A1W2PQJ5 194 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 H3BMH7 237 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 SRP72O76094 671 aaKnown RBP14.29□□□□□ -0.12
HDAC8-213ENST00000436675 PDHA2P29803 388 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 TSFMP43897 325 aaKnown RBP14.29□□□□□ -0.12
HDAC8-213ENST00000436675 KCNK10P57789 538 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 TMPRSS15P98073 1019 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 WASHC5Q12768 1159 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 PRKD1Q15139 912 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-213ENST00000436675 AGAP7PQ5VUJ5 663 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 PRAMEF13Q5VWM6 474 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 SARM1Q6SZW1 724 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 SPESP1Q6UW49 350 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 MICALCLQ6ZW33 695 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 LINC00615Q96LM1 132 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-213ENST00000436675 AGAP4Q96P64 663 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 AP1M1Q9BXS5 423 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 TFB2MQ9H5Q4 396 aaKnown RBP14.29□□□□□ -0.12
HDAC8-213ENST00000436675 COG4Q9H9E3 785 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 UVRAGQ9P2Y5 699 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 CRLS1Q9UJA2 301 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 CDC23Q9UJX2 597 aa14.29□□□□□ -0.12
HDAC8-213ENST00000436675 A0A1B0GUH1 482 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 KLHL33A6NCF5 533 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 IFRD1O00458 451 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-213ENST00000436675 ZSCAN9O15535 394 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-213ENST00000436675 SERPINC1P01008 464 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 AGTP01019 485 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 EPOP01588 193 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 STSP08842 583 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 H2AFZP0C0S5 128 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 PYGMP11217 842 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 RALBP11234 206 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 PECAM1P16284 738 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-213ENST00000436675 UGT2B7P16662 529 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 ZFXP17010 805 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-213ENST00000436675 ALAS2P22557 587 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 GABRA4P48169 554 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 NR1I3Q14994 352 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 ODF2Q5BJF6 829 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 IRAK1BP1Q5VVH5 260 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 MRPL14Q6P1L8 145 aaKnown RBP14.28□□□□□ -0.12
HDAC8-213ENST00000436675 FAM180AQ6UWF9 173 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 LINC00696Q6ZRV3 163 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 SHISA6Q6ZSJ9 500 aa14.28□□□□□ -0.12
HDAC8-213ENST00000436675 H2AFVQ71UI9 128 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms