RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 OR2A14Q96R47 310 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 MCMBPQ9BTE3 642 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 VNN3Q9NY84 501 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TAS2R16Q9NYV7 291 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF224Q9NZL3 707 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TMEFF2Q9UIK5 374 aaPredicted RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 FZD10Q9ULW2 581 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 ADAMTSL1Q8N6G6 1762 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TANC1Q9C0D5 1861 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 PNMA8CA0A1B0GUJ8 204 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 HMX3A6NHT5 357 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 SUPT3HB4E1H0 165 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 PPEF2O14830 753 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 NUPL2O15504 423 aaKnown RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TULP3O75386 442 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 WDR47O94967 919 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 RFX2P48378 723 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 ATP4BP51164 291 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 PARP15Q460N3 678 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 GLCCI1Q86VQ1 547 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 ADHFE1Q8IWW8 467 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 PPHLN1Q8NEY8 458 aaKnown RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 UBXN10Q96LJ8 280 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 CDK15Q96Q40 435 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 SDHCQ99643 169 aaPredicted RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 LYVE1Q9Y5Y7 322 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TRAV19A0A0A6YYK7 116 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 CAPN5O15484 640 aaPredicted RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 B4GALT4O60513 344 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 CHRM5P08912 532 aaPredicted RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SSTR4P31391 388 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 TNFSF8P32971 234 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 GRIK1P39086 918 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 RECQLP46063 649 aaPredicted RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 NDUFV1P49821 464 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SUZ12Q15022 739 aaKnown RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 GTDC1Q4AE62 458 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 ESCO2Q56NI9 601 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 ARMCX4Q5H9R4 360 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 LUZP2Q86TE4 346 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 PHC2Q8IXK0 858 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SLC35F5Q8WV83 523 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 ATG4CQ96DT6 458 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 REXO5Q96IC2 774 aaKnown RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 C17orf62Q9BQA9 187 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SLC30A2Q9BRI3 323 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 FSD1LQ9BXM9 530 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SARS2Q9NP81 518 aaKnown RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 NAALAD2Q9Y3Q0 740 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 A0A1W2PQ09 198 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 CCDC182A6NF36 153 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 DDCP20711 480 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 CDKN2DP55273 166 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 HOXC5Q00444 222 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 POU4F1Q01851 419 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 EMX2Q04743 252 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 RCAN2Q14206 197 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 GBX1Q14549 363 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 MFSD10Q14728 455 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 GPR153Q6NV75 609 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 PRSS48Q7RTY5 328 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 ISCA2Q86U28 154 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 PHYKPLQ8IUZ5 450 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 NLGN1Q8N2Q7 840 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 CDYL2Q8N8U2 506 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 TTC29Q8NA56 475 aaPredicted RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SETD9Q8NE22 299 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 RNF170Q96K19 258 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SIK2Q9H0K1 926 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 MINDY3Q9H8M7 445 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 MPP6Q9NZW5 540 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 VAPAQ9P0L0 249 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 PEX16Q9Y5Y5 336 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 OR2A25A4D2G3 310 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 CLCN3P51790 818 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 MXD1Q05195 221 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 KCTD11Q693B1 232 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 CEP68Q76N32 757 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 OR8H3Q8N146 312 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 OR4M1Q8NGD0 313 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 DNASE1L2Q92874 299 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SLC39A13Q96H72 371 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 KIFC1Q9BW19 673 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 TMEM134Q9H6X4 195 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 KIF17Q9P2E2 1029 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SHROOM3Q8TF72 1996 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 M0R082 166 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 M0R129 80 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 ICAM2P13598 275 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 MYL9P24844 172 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SCNN1GP51170 649 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 CREMQ03060 361 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 ADIGQ0VDE8 80 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 PRKG2Q13237 762 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 COQ8BQ96D53 544 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 MUC13Q9H3R2 512 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 IKZF5Q9H5V7 419 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 GABRQQ9UN88 632 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 CLCA3PQ9Y6N3 262 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 LEUTXA8MZ59 168 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms