RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SRCP12931 536 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 EPB42P16452 691 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 GGT1P19440 569 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 RPS9P46781 194 aaKnown RBP18.21■□□□□ 0.51
CLK1-205ENST00000434813 SNRPD1P62314 119 aaKnown RBP18.21■□□□□ 0.51
CLK1-205ENST00000434813 CDKL4Q5MAI5 379 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 RALGPS2Q86X27 583 aaPredicted RBP18.21■□□□□ 0.51
CLK1-205ENST00000434813 TMC8Q8IU68 726 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 USP7Q93009 1102 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 SCRN2Q96FV2 425 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 SEPHS2Q99611 448 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 BDH2Q9BUT1 245 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 PIF1Q9H611 641 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 ZDHHC3Q9NYG2 299 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 PRKAG2Q9UGJ0 569 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 PPIL1Q9Y3C6 166 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 PLXNB3Q9ULL4 1909 aa18.21■□□□□ 0.51
CLK1-205ENST00000434813 KIAA0100Q14667 2235 aaKnown RBP18.21■□□□□ 0.51
CLK1-205ENST00000434813 MANBAO00462 879 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 ULK1O75385 1050 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 ANXA6P08133 673 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 SPATA31D3P0C874 917 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 AKT1P31749 480 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 CA8P35219 290 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 CAPGP40121 348 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 GNPDA1P46926 289 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 AAK1Q2M2I8 961 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 PYCR3Q53H96 274 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 CACHD1Q5VU97 1274 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 LRRC66Q68CR7 880 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 TTC33Q6PID6 262 aaPredicted RBP18.2■□□□□ 0.5
CLK1-205ENST00000434813 SPATA31D4Q6ZUB0 917 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 USP45Q70EL2 814 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 NUDT8Q8WV74 236 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 FARSBQ9NSD9 589 aaKnown RBP18.2■□□□□ 0.5
CLK1-205ENST00000434813 PCDH10Q9P2E7 1040 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 ZNF490Q9ULM2 529 aaPredicted RBP18.2■□□□□ 0.5
CLK1-205ENST00000434813 A0A087WXM4 84 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 CCDC85CA6NKD9 419 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 A8MX80 341 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 H3BSA7 217 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 EIF3FO00303 357 aaPredicted RBP18.2■□□□□ 0.5
CLK1-205ENST00000434813 STK16O75716 305 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 ARHGEF15O94989 841 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 HMGCS1Q01581 520 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 C22orf39Q6P5X5 142 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 TTC23LQ6PF05 361 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 ZNF786Q8N393 782 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 GTF2H4Q92759 462 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 ULK4Q96C45 1275 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 LMLNQ96KR4 655 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 RNF145Q96MT1 663 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 MCCC1Q96RQ3 725 aaPredicted RBP18.2■□□□□ 0.5
CLK1-205ENST00000434813 COPS8Q99627 209 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 LRTM1Q9HBL6 345 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 VAPAQ9P0L0 249 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 RSL24D1Q9UHA3 163 aaKnown RBP18.2■□□□□ 0.5
CLK1-205ENST00000434813 HS3ST2Q9Y278 367 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 V9GYQ6 96 aa18.2■□□□□ 0.5
CLK1-205ENST00000434813 LAMA2P24043 3122 aaKnown RBP18.19■□□□□ 0.5
CLK1-205ENST00000434813 PIKFYVEQ9Y2I7 2098 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 IGLV3-16A0A075B6K0 115 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 LOC730098B7Z3J9 87 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 DFNA5O60443 496 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 PRSS23O95084 383 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 MT-ND1P03886 318 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 IL6P05231 212 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 ANXA5P08758 320 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 SLC5A2P31639 672 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 STK19P49842 368 aaPredicted RBP18.19■□□□□ 0.5
CLK1-205ENST00000434813 CREMQ03060 361 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 IMPG1Q17R60 797 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 FAM174BQ3ZCQ3 159 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 AP1ARQ63HQ0 302 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 MBOAT1Q6ZNC8 495 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 GPR65Q8IYL9 337 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 RGL4Q8IZJ4 473 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 LIX1Q8N485 282 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 DHRSXQ8N5I4 330 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 LEMD2Q8NC56 503 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 CYGBQ8WWM9 190 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 VPS50Q96JG6 964 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 ZNF583Q96ND8 569 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 DPY30Q9C005 99 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 CLMPQ9H6B4 373 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 FADS3Q9Y5Q0 445 aa18.19■□□□□ 0.5
CLK1-205ENST00000434813 TRAV19A0A0A6YYK7 116 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 CLOCKO15516 846 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 LILRB3O75022 631 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 RAP2AP10114 183 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 LHCGRP22888 699 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 CTSOP43234 321 aaPredicted RBP18.18■□□□□ 0.5
CLK1-205ENST00000434813 CDK9P50750 372 aaKnown RBP18.18■□□□□ 0.5
CLK1-205ENST00000434813 CDH15P55291 814 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 B4GALNT1Q00973 533 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 ARHGEF7Q14155 803 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 TMEM259Q4ZIN3 620 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 CYBRD1Q53TN4 286 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 PATL1Q86TB9 770 aaKnown RBP18.18■□□□□ 0.5
CLK1-205ENST00000434813 HS6ST3Q8IZP7 471 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms