RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 HJURPQ8NCD3 748 aaPredicted RBP4.9□□□□□ -1.63
SFXN1-202ENST00000421887 WFDC5Q8TCV5 224 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 SLC45A3Q96JT2 553 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 CCDC114Q96M63 670 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 AK8Q96MA6 479 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 PPP1R9BQ96SB3 815 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 C11orf54Q9H0W9 315 aaPredicted RBP4.9□□□□□ -1.63
SFXN1-202ENST00000421887 SMYD3Q9H7B4 428 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 CCM2LQ9NUG4 571 aaPredicted RBP4.9□□□□□ -1.63
SFXN1-202ENST00000421887 SLCO3A1Q9UIG8 710 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 ERRFI1Q9UJM3 462 aaPredicted RBP4.9□□□□□ -1.63
SFXN1-202ENST00000421887 SLC25A13Q9UJS0 675 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 HBS1LQ9Y450 684 aaKnown RBP4.9□□□□□ -1.63
SFXN1-202ENST00000421887 RNF215Q9Y6U7 377 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 BSNQ9UPA5 3926 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 CRYBG3Q68DQ2 2970 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 ITIH6Q6UXX5 1313 aa4.9□□□□□ -1.63
SFXN1-202ENST00000421887 SETD2Q9BYW2 2564 aaPredicted RBP4.9□□□□□ -1.63
SFXN1-202ENST00000421887 HIVEP3Q5T1R4 2406 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 SHANK1Q9Y566 2161 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 TNRC6AQ8NDV7 1962 aaKnown RBP4.89□□□□□ -1.63
SFXN1-202ENST00000421887 A0A1W2PQM1 296 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 POM121BA6NF01 834 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 TCP11X1B4DZS4 312 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 HHLA1C9JL84 531 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 KPNA3O00505 521 aaPredicted RBP4.89□□□□□ -1.63
SFXN1-202ENST00000421887 ALOX15BO15296 676 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 INPP4BO15327 924 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 EPB41L2O43491 1005 aaKnown RBP4.89□□□□□ -1.63
SFXN1-202ENST00000421887 RAD1O60671 282 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 PAK4O96013 591 aaPredicted RBP4.89□□□□□ -1.63
SFXN1-202ENST00000421887 ALPIP09923 528 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 PRF1P14222 555 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 MAN1A1P33908 653 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 SGSHP51688 502 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 METAP1P53582 386 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 RPS21P63220 83 aaKnown RBP4.89□□□□□ -1.63
SFXN1-202ENST00000421887 ZFP36L1Q07352 338 aaKnown RBP4.89□□□□□ -1.63
SFXN1-202ENST00000421887 DAZAP2Q15038 168 aaPredicted RBP4.89□□□□□ -1.63
SFXN1-202ENST00000421887 SNRNP35Q16560 246 aaKnown RBP4.89□□□□□ -1.63
SFXN1-202ENST00000421887 ME3Q16798 604 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 ZNF284Q2VY69 593 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 ZNF551Q7Z340 670 aaPredicted RBP4.89□□□□□ -1.63
SFXN1-202ENST00000421887 PIM3Q86V86 326 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 UNC93AQ86WB7 457 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 GKN2Q86XP6 184 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 NRSN1Q8IZ57 195 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 RBFAQ8N0V3 343 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 CRYBG2Q8N1P7 616 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 GALNT16Q8N428 558 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 PNLDC1Q8NA58 520 aaKnown RBP4.89□□□□□ -1.63
SFXN1-202ENST00000421887 STARD8Q92502 1023 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 RAD54LQ92698 747 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 FAM131CQ96AQ9 280 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 FKBP10Q96AY3 582 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 PPP1R16AQ96I34 528 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 FEM1CQ96JP0 617 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 SLC17A9Q9BYT1 436 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 UNKQ9C0B0 810 aaKnown RBP4.89□□□□□ -1.63
SFXN1-202ENST00000421887 PPCSQ9HAB8 311 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 SLAMF7Q9NQ25 335 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 STOML2Q9UJZ1 356 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 ENTPD4Q9Y227 616 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 LRBAP50851 2863 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 CELSR2Q9HCU4 2923 aa4.89□□□□□ -1.63
SFXN1-202ENST00000421887 CHD5Q8TDI0 1954 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 GOLGA6L7A0A1B0GV03 622 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 F5H697 171 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 MCF2LO15068 1137 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 PMM2O15305 246 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 EIF3DO15371 548 aaKnown RBP eCLIP4.88□□□□□ -1.63
SFXN1-202ENST00000421887 DUX1O43812 170 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 LRCH4O75427 683 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 GCATO75600 419 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 ZRANB2O95218 330 aaKnown RBP eCLIP4.88□□□□□ -1.63
SFXN1-202ENST00000421887 LUC7L3O95232 432 aaKnown RBP4.88□□□□□ -1.63
SFXN1-202ENST00000421887 ALPLP05186 524 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 CCL4P13236 92 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 TSHRP16473 764 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 OAS2P29728 719 aaKnown RBP4.88□□□□□ -1.63
SFXN1-202ENST00000421887 CSTF2P33240 577 aaKnown RBP eCLIP4.88□□□□□ -1.63
SFXN1-202ENST00000421887 HTR3AP46098 478 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 PPM1FP49593 454 aaPredicted RBP4.88□□□□□ -1.63
SFXN1-202ENST00000421887 STK19P49842 368 aaPredicted RBP4.88□□□□□ -1.63
SFXN1-202ENST00000421887 TOB1P50616 345 aaPredicted RBP4.88□□□□□ -1.63
SFXN1-202ENST00000421887 TKTL1P51854 596 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 TAS2R38P59533 333 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 PPARDQ03181 441 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 TUBB3Q13509 450 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 SLC12A1Q13621 1099 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 BMPR2Q13873 1038 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 SGSM1Q2NKQ1 1148 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 RILPL1Q5EBL4 403 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 ZRANB3Q5FWF4 1079 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 DCAF12Q5T6F0 453 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 PIP5KL1Q5T9C9 394 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 ARL6IP4Q66PJ3 421 aaKnown RBP4.88□□□□□ -1.63
SFXN1-202ENST00000421887 SEL1L3Q68CR1 1132 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 LVRNQ6Q4G3 990 aa4.88□□□□□ -1.63
SFXN1-202ENST00000421887 MMS22LQ6ZRQ5 1243 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms