RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ZNF449Q6P9G9 518 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 IGFL3Q6UXB1 125 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 SNX20Q7Z614 316 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 MRGPREQ86SM8 312 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 KATNAL2Q8IYT4 538 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 CISD2Q8N5K1 135 aaKnown RBP16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 CLEC1AQ8NC01 280 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 PHC3Q8NDX5 983 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 OR13C4Q8NGS5 318 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 NRTNQ99748 197 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 APOL2Q9BQE5 337 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 KLHL25Q9H0H3 589 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 FAM96AQ9H5X1 160 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 VPS37BQ9H9H4 285 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 ACTR10Q9NZ32 417 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 SLC5A6Q9Y289 635 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 PRRC2CQ9Y520 2896 aaKnown RBP16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 AP1M2Q9Y6Q5 423 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 IGLV3-16A0A075B6K0 115 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 H7C0C1 242 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 PEX12O00623 359 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 LDB2O43679 373 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 TPM1P09493 284 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 PDHA2P29803 388 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 DCTP40126 519 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 ATP5OP48047 213 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 ZNF140P52738 457 aaPredicted RBP16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 HADHBP55084 474 aaKnown RBP16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 BOP1Q14137 746 aaKnown RBP16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 MYBPC3Q14896 1274 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 GPR33Q49SQ1 333 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 DCAF10Q5QP82 559 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 MLIPQ5VWP3 458 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 LYPLAL1Q5VWZ2 237 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 SPESP1Q6UW49 350 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 BBS12Q6ZW61 710 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 HOOK3Q86VS8 718 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 CCDC50Q8IVM0 306 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 GALNT16Q8N428 558 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 TFGQ92734 400 aaPredicted RBP16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 N4BP2L2Q92802 583 aaPredicted RBP16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 FERMT1Q9BQL6 677 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 CHRNA10Q9GZZ6 450 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 XKR8Q9H6D3 395 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 C10orf88Q9H8K7 445 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 ZDHHC3Q9NYG2 299 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 GPN3Q9UHW5 284 aaPredicted RBP16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 AAR2Q9Y312 384 aaKnown RBP16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 MYO9AB2RTY4 2548 aa16.31■□□□□ 0.2
UPF3AP3-201ENST00000420996 ANKRD12Q6UB98 2062 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 H3BMH7 237 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 OR2B3O76000 313 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 CBSLP0DN79 551 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 CBSP35520 551 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 TMPRSS15P98073 1019 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 PRKG2Q13237 762 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 OLIG2Q13516 323 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 PRPSAP1Q14558 356 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 ZRANB3Q5FWF4 1079 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 CRB2Q5IJ48 1285 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 RHBDD2Q6NTF9 364 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 C19orf47Q8N9M1 422 aaKnown RBP16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 PROKR1Q8TCW9 393 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 C5orf34Q96MH7 638 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 HGH1Q9BTY7 390 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 HEMGNQ9BXL5 484 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 ZNF552Q9H707 407 aaPredicted RBP16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 FAM60AQ9NP50 221 aa16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 PTRH2Q9Y3E5 179 aaKnown RBP16.3■□□□□ 0.2
UPF3AP3-201ENST00000420996 CREBBPQ92793 2442 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 TRBV5-4A0A0C4DH59 114 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 ANKUB1A6NFN9 424 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 APOC4-APOC2K7ER74 178 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 CBFA2T2O43439 604 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 IPO13O94829 963 aaKnown RBP16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 APOC2P02655 101 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 GSTM1P09488 218 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 FOLR3P41439 243 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 GABRA4P48169 554 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 SOX8P57073 446 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 DCDP81605 110 aaKnown RBP16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 GSTM4Q03013 218 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 ANKRD20A2Q5SQ80 823 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 ANKRD20A1Q5TYW2 823 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 ANKRD20A3Q5VUR7 823 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 DENND5AQ6IQ26 1287 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 OR2Y1Q8NGV0 311 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 TM9SF4Q92544 642 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 PTERQ96BW5 349 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 GBP5Q96PP8 586 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 RANBP9Q96S59 729 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 BARD1Q99728 777 aaKnown RBP16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 AP1M1Q9BXS5 423 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 SPRTNQ9H040 489 aaPredicted RBP16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 ILKAPQ9H0C8 392 aaPredicted RBP16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 GOLPH3Q9H4A6 298 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 ARNT2Q9HBZ2 717 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 P4HTMQ9NXG6 502 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 IFT80Q9P2H3 777 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms