RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 LPGAT1Q92604 370 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 RSRC1Q96IZ7 334 aaKnown RBP4□□□□□ -1.77
HMGB1P49-201ENST00000418882 NEK1Q96PY6 1258 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 MOV10L1Q9BXT6 1211 aaKnown RBP4□□□□□ -1.77
HMGB1P49-201ENST00000418882 LAT2Q9GZY6 243 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF701Q9NV72 531 aaPredicted RBP4□□□□□ -1.77
HMGB1P49-201ENST00000418882 NSMCE4AQ9NXX6 385 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 PSD3Q9NYI0 1048 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 CRNNQ9UBG3 495 aaPredicted RBP4□□□□□ -1.77
HMGB1P49-201ENST00000418882 SNED1Q8TER0 1413 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 PRR32B1ATL7 298 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 CLIC2O15247 247 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 PRAMEF11O60813 436 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 MED24O75448 989 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 CAVIN2O95810 425 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 WNT5AP41221 380 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 NTRK2Q16620 822 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 SPDYCQ5MJ68 293 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 RNASEH2BQ5TBB1 312 aaKnown RBP3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 TMED8Q6PL24 325 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 TMPRSS11FQ6ZWK6 438 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 SLC16A9Q7RTY1 509 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF554Q86TJ5 538 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 ARHGAP24Q8N264 748 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 MINDY1Q8N5J2 469 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 ADAD2Q8NCV1 583 aaKnown RBP3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 MOSPD2Q8NHP6 518 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 PRPF31Q8WWY3 499 aaKnown RBP3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 TMEM143Q96AN5 459 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 TMCO6Q96DC7 493 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 BTBD10Q9BSF8 475 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 LMF2Q9BU23 707 aaKnown RBP3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 TEX12Q9BXU0 123 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 BARHL1Q9BZE3 327 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 S1PR5Q9H228 398 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 MMP27Q9H306 513 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 Q9N2K0 584 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 GIMAP4Q9NUV9 329 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 CACNG5Q9UF02 275 aa3.99□□□□□ -1.77
HMGB1P49-201ENST00000418882 IGHV4-61A0A0C4DH41 118 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 LOC101059948A0A1B0GTJ6 334 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 GLOD5A6NK44 160 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 ERAL1O75616 437 aaKnown RBP3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 TRMUO75648 421 aaKnown RBP3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 IGHV4-59P01825 116 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF883P0CG24 379 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF26P17031 533 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 CA4P22748 312 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 PRKG2Q13237 762 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 TMEM187Q14656 261 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 GTDC1Q4AE62 458 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 CYP4A22Q5TCH4 519 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 CFAP161Q6P656 301 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF790Q6PG37 636 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF497Q6ZNH5 498 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 PAPD5Q8NDF8 572 aaKnown RBP3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 FNBP1Q96RU3 617 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 GOLPH3LQ9H4A5 285 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 SDR39U1Q9NRG7 319 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 ECHDC1Q9NTX5 307 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 C2orf42Q9NWW7 574 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 RPS6KA6Q9UK32 745 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 SNX8Q9Y5X2 465 aa3.98□□□□□ -1.77
HMGB1P49-201ENST00000418882 ATP6V0E1O15342 81 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 TPOP07202 933 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 OR2T7P0C7T2 308 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 SAT1P21673 171 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 PTPN3P26045 913 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 HILS1P60008 231 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 SP3Q02447 781 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 GPR17Q13304 367 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 BAATQ14032 418 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 NR1D2Q14995 579 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 RALBP1Q15311 655 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 BHLHB9Q6PI77 547 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 TMPRSS11BQ86T26 416 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 TMEM173Q86WV6 379 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 TMEM139Q8IV31 216 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 OR2T11Q8NH01 316 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 IRGQQ8WZA9 623 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 GCNAQ96QF7 691 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 CCDC68Q9H2F9 335 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 INTS9Q9NV88 658 aaKnown RBP3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 MRPL15Q9P015 296 aaKnown RBP3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 B3GAT1Q9P2W7 334 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 LRWD1Q9UFC0 647 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 CHORDC1Q9UHD1 332 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 TMEM5Q9Y2B1 443 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 MRPS28Q9Y2Q9 187 aaKnown RBP3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 KAT6BQ8WYB5 2073 aa3.97□□□□□ -1.77
HMGB1P49-201ENST00000418882 PCDH11YQ9BZA8 1340 aa3.96□□□□□ -1.77
HMGB1P49-201ENST00000418882 A0A1W2PPM1 405 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 PIGNO95427 931 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 GPIP06744 558 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 EFNA1P20827 205 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 IFI35P80217 286 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 KLHL26Q53HC5 615 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 XKR3Q5GH77 459 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms