RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 TYRP1P17643 537 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 MAGEA4P43358 317 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 LSSP48449 732 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 CSE1LP55060 971 aaKnown RBP18.14■□□□□ 0.49
PTCD3-204ENST00000418628 GFERP55789 205 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 GRB7Q14451 532 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 NEK10Q6ZWH5 1172 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 ZBTB2Q8N680 514 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 OR52E1Q8NGJ3 308 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 WDR36Q8NI36 951 aaKnown RBP18.14■□□□□ 0.49
PTCD3-204ENST00000418628 JPH3Q8WXH2 748 aaPredicted RBP18.14■□□□□ 0.49
PTCD3-204ENST00000418628 AHCYL2Q96HN2 611 aaKnown RBP18.14■□□□□ 0.49
PTCD3-204ENST00000418628 C9orf72Q96LT7 481 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 LRRC4CQ9HCJ2 640 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 ZFATQ9P243 1243 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 SATB2Q9UPW6 733 aa18.14■□□□□ 0.49
PTCD3-204ENST00000418628 ESPNB1AK53 854 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 MLLT3P42568 568 aaPredicted RBP18.13■□□□□ 0.49
PTCD3-204ENST00000418628 PPP1CAP62136 330 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 PLCL1Q15111 1095 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 PRSS42Q7Z5A4 293 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 ZC3HC1Q86WB0 502 aaKnown RBP18.13■□□□□ 0.49
PTCD3-204ENST00000418628 PLXDC1Q8IUK5 500 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 PHC3Q8NDX5 983 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 NCSTNQ92542 709 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 FERD3LQ96RJ6 166 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 GPR21Q99679 349 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 NRTNQ99748 197 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 HGH1Q9BTY7 390 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 STRADBQ9C0K7 418 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 TRIT1Q9H3H1 467 aaKnown RBP18.13■□□□□ 0.49
PTCD3-204ENST00000418628 POLR1BQ9H9Y6 1135 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 ASCL3Q9NQ33 180 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 ICKQ9UPZ9 632 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 ASF1AQ9Y294 204 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 DHRS7Q9Y394 339 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 CELSR3Q9NYQ7 3312 aa18.13■□□□□ 0.49
PTCD3-204ENST00000418628 CXorf49A8MYA2 514 aaPredicted RBP18.12■□□□□ 0.49
PTCD3-204ENST00000418628 E5RI56 91 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 EIF3FO00303 357 aaPredicted RBP18.12■□□□□ 0.49
PTCD3-204ENST00000418628 TOX3O15405 576 aaPredicted RBP18.12■□□□□ 0.49
PTCD3-204ENST00000418628 SPAG6O75602 509 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 CHRM3P20309 590 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 FDXRP22570 491 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 ABCG1P45844 678 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 MAPK9P45984 424 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 CUL1Q13616 776 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 ACSBG2Q5FVE4 666 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 C3orf38Q5JPI3 329 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 CCDC25Q86WR0 208 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 SPNS2Q8IVW8 549 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 DCUN1D3Q8IWE4 304 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 SIDT2Q8NBJ9 832 aaKnown RBP18.12■□□□□ 0.49
PTCD3-204ENST00000418628 FAM136AQ96C01 138 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 FMO2Q99518 471 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 NDNQ99608 321 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 FUT8Q9BYC5 575 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 CCDC68Q9H2F9 335 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 PPANQ9NQ55 473 aaKnown RBP18.12■□□□□ 0.49
PTCD3-204ENST00000418628 NSMCE4AQ9NXX6 385 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 POLG2Q9UHN1 485 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 PTPRQQ9UMZ3 2332 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 PKD1L2Q7Z442 2459 aa18.12■□□□□ 0.49
PTCD3-204ENST00000418628 KMT2BQ9UMN6 2715 aaPredicted RBP18.11■□□□□ 0.49
PTCD3-204ENST00000418628 TMEM8BA6NDV4 472 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 PLD2O14939 933 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 CAPN5O15484 640 aaPredicted RBP18.11■□□□□ 0.49
PTCD3-204ENST00000418628 MPOP05164 745 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 ENO3P13929 434 aaPredicted RBP18.11■□□□□ 0.49
PTCD3-204ENST00000418628 AMD1P17707 334 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 CDKN2DP55273 166 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 GABREP78334 506 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 KYNUQ16719 465 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 PHF19Q5T6S3 580 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 KLHL35Q6PF15 583 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 CAPN12Q6ZSI9 719 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 RAB11FIP2Q7L804 512 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 OOSP2Q86WS3 158 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 PALM2Q8IXS6 379 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 ADGRF3Q8IZF5 1079 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 BMPERQ8N8U9 685 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 RCBTB1Q8NDN9 531 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 INPP5DQ92835 1189 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 SIDT1Q9NXL6 827 aaKnown RBP18.11■□□□□ 0.49
PTCD3-204ENST00000418628 MTRF1LQ9UGC7 380 aaKnown RBP18.11■□□□□ 0.49
PTCD3-204ENST00000418628 POMT2Q9UKY4 750 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 LOXL2Q9Y4K0 774 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 NFS1Q9Y697 457 aa18.11■□□□□ 0.49
PTCD3-204ENST00000418628 CDRT15L2A8MXV6 281 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 BTN3A3O00478 584 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 BRINP1O60477 761 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 VPS26AO75436 327 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 PSIP1O75475 530 aaKnown RBP18.1■□□□□ 0.49
PTCD3-204ENST00000418628 C1orf105O95561 183 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 RPN2P04844 631 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 MPC1LP0DKB6 136 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 CBSLP0DN79 551 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 MPSTP25325 297 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 PKLRP30613 574 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 CBSP35520 551 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms