RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 MR1Q95460 341 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 PPM1MQ96MI6 270 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 PITPNM3Q9BZ71 974 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 AKIRIN1Q9H9L7 192 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-208ENST00000417285 POLG2Q9UHN1 485 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 SERTAD3Q9UJW9 196 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 HECTD1Q9ULT8 2610 aa24.57■■□□□ 1.52
VEGFA-208ENST00000417285 RFPL1O75677 317 aa24.57■■□□□ 1.52
VEGFA-208ENST00000417285 OR56A5P0C7T3 313 aa24.57■■□□□ 1.52
VEGFA-208ENST00000417285 ADRA1DP25100 572 aa24.57■■□□□ 1.52
VEGFA-208ENST00000417285 PMS2P54278 862 aa24.57■■□□□ 1.52
VEGFA-208ENST00000417285 FBXO38Q6PIJ6 1188 aa24.57■■□□□ 1.52
VEGFA-208ENST00000417285 MICALCLQ6ZW33 695 aa24.57■■□□□ 1.52
VEGFA-208ENST00000417285 APLFQ8IW19 511 aaPredicted RBP24.57■■□□□ 1.52
VEGFA-208ENST00000417285 TRIM58Q8NG06 486 aa24.57■■□□□ 1.52
VEGFA-208ENST00000417285 RANBP9Q96S59 729 aa24.57■■□□□ 1.52
VEGFA-208ENST00000417285 MAN2B2Q9Y2E5 1009 aa24.57■■□□□ 1.52
VEGFA-208ENST00000417285 ZKSCAN5Q9Y2L8 839 aa24.57■■□□□ 1.52
VEGFA-208ENST00000417285 CCDC162PA2VCL2 907 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 BTN3A1O00481 513 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 ETS1P14921 441 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 PPARGP37231 505 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-208ENST00000417285 PRKG2Q13237 762 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 UGT8Q16880 541 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 IZUMO3Q5VZ72 239 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 DRICH1Q6PGQ1 229 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-208ENST00000417285 TBC1D21Q8IYX1 336 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 ADGRF3Q8IZF5 1079 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 ELMO1Q92556 727 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 HDAC10Q969S8 669 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 TLR10Q9BXR5 811 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 CASS4Q9NQ75 786 aa24.56■■□□□ 1.52
VEGFA-208ENST00000417285 OR51F1A6NGY5 319 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 MEN1O00255 615 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 KDM1AO60341 852 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 APRTP07741 180 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 FOXN2P32314 431 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 KLRB1Q12918 225 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 GPS2Q13227 327 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 SIX1Q15475 284 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-208ENST00000417285 PLEKHS1Q5SXH7 462 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 TSTD2Q5T7W7 516 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 AFTPHQ6ULP2 937 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 C4orf22Q6V702 233 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 PRUNE1Q86TP1 453 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 HOOK3Q86VS8 718 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 SLC38A9Q8NBW4 561 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 OR13J1Q8NGT2 312 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 PEX13Q92968 403 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 SGSM3Q96HU1 749 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 TRAPPC9Q96Q05 1148 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 ASF1AQ9Y294 204 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 DRG1Q9Y295 367 aaKnown RBP24.55■■□□□ 1.52
VEGFA-208ENST00000417285 PRSS21Q9Y6M0 314 aa24.55■■□□□ 1.52
VEGFA-208ENST00000417285 RAB40ALP0C0E4 278 aa24.54■■□□□ 1.52
VEGFA-208ENST00000417285 ACADLP28330 430 aa24.54■■□□□ 1.52
VEGFA-208ENST00000417285 SHMT2P34897 504 aa24.54■■□□□ 1.52
VEGFA-208ENST00000417285 GRIA1P42261 906 aa24.54■■□□□ 1.52
VEGFA-208ENST00000417285 GLIS1Q8NBF1 620 aa24.54■■□□□ 1.52
VEGFA-208ENST00000417285 OR4L1Q8NH43 312 aa24.54■■□□□ 1.52
VEGFA-208ENST00000417285 CLIP3Q96DZ5 547 aa24.54■■□□□ 1.52
VEGFA-208ENST00000417285 HGH1Q9BTY7 390 aa24.54■■□□□ 1.52
VEGFA-208ENST00000417285 EPN3Q9H201 632 aa24.54■■□□□ 1.52
VEGFA-208ENST00000417285 ACTR10Q9NZ32 417 aa24.54■■□□□ 1.52
VEGFA-208ENST00000417285 TLK1Q9UKI8 766 aa24.54■■□□□ 1.52
VEGFA-208ENST00000417285 NBASA2RRP1 2371 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 SLC5A10A0PJK1 596 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 TMEM150CB9EJG8 249 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 FGGP02679 453 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 HBQ1P09105 142 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 ST6GAL1P15907 406 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 CYP2A7P20853 494 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 RPL22P35268 128 aaKnown RBP24.53■■□□□ 1.52
VEGFA-208ENST00000417285 CCZ1BP86790 482 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 CCZ1P86791 482 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-208ENST00000417285 ACVR1Q04771 509 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 GSTA5Q7RTV2 222 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 TMEM135Q86UB9 458 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 DSELQ8IZU8 1212 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 PPHLN1Q8NEY8 458 aaKnown RBP24.53■■□□□ 1.52
VEGFA-208ENST00000417285 OR1L3Q8NH93 324 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 DPH2Q9BQC3 489 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-208ENST00000417285 NLNQ9BYT8 704 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 CHST8Q9H2A9 424 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 XKR8Q9H6D3 395 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 ACTR5Q9H9F9 607 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-208ENST00000417285 OR6C2Q9NZP2 312 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 TP53TG5Q9Y2B4 290 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 TCAF1Q9Y4C2 921 aa24.53■■□□□ 1.52
VEGFA-208ENST00000417285 GOT2P00505 430 aaKnown RBP24.52■■□□□ 1.52
VEGFA-208ENST00000417285 ZSCAN5DPP0CG00 497 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 PRAMEP78395 509 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 SYTL3Q4VX76 610 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 SPESP1Q6UW49 350 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 UNC5AQ6ZN44 842 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 ASB18Q6ZVZ8 466 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 TEX19Q8NA77 164 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 OR5AR1Q8NGP9 310 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 OR6P1Q8NGX9 317 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 OR5K2Q8NHB8 316 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms