RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 SIRPB2Q5JXA9 342 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 FAM182AQ5T1J6 154 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 USP45Q70EL2 814 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 CAND1Q86VP6 1230 aaKnown RBP13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 RELL1Q8IUW5 271 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 MMP21Q8N119 569 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 SLC25A41Q8N5S1 370 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 LPCAT1Q8NF37 534 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 FDCSPQ8NFU4 85 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 PIH1D2Q8WWB5 315 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 NUDT9Q9BW91 350 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 TEX101Q9BY14 249 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 MAGEE1Q9HCI5 957 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 PPIL1Q9Y3C6 166 aa13.24□□□□□ -0.29
RAPGEF1-204ENST00000414781 A0A1B0GUH1 482 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 CCDC151A5D8V7 595 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 C2orf81A6NN90 581 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 E7ESA3 106 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 PRLP01236 227 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 CD1EP15812 388 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 LPOP22079 712 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 SSTR2P30874 369 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 MAGEA3P43357 314 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 PDIA2Q13087 525 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 LRP8Q14114 963 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 IHHQ14623 411 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 KCTD19Q17RG1 926 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 BBS9Q3SYG4 887 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 PCID2Q5JVF3 399 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 VWA5B1Q5TIE3 1220 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 DENND5AQ6IQ26 1287 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 CASC4Q6P4E1 433 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 LIPIQ6XZB0 460 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 CCDC25Q86WR0 208 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 PPP1R3BQ86XI6 285 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 AVL9Q8NBF6 648 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 PPHLN1Q8NEY8 458 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 BRSK1Q8TDC3 778 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 PYROXD1Q8WU10 500 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 SCRN2Q96FV2 425 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 TTC25Q96NG3 672 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 OR2M4Q96R27 311 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 OR6C1Q96RD1 312 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 C19orf43Q9BQ61 176 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 APOL2Q9BQE5 337 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 ILKAPQ9H0C8 392 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 SLC17A4Q9Y2C5 497 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 ST14Q9Y5Y6 855 aa13.23□□□□□ -0.29
RAPGEF1-204ENST00000414781 UQCRHLA0A096LP55 91 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 A0A0J9YYE9 177 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 SPAG6O75602 509 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 TTC4O95801 387 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 TRBC1P01850 177 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 FUCA1P04066 466 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 UQCRHP07919 91 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 PDHA1P08559 390 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 BPIP17213 487 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 ECHS1P30084 290 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 GRIA1P42261 906 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 MAGEA4P43358 317 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 MAPK9P45984 424 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 RRADP55042 308 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 DHX9Q08211 1270 aaKnown RBP13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 RALGDSQ12967 914 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 IL10RAQ13651 578 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 GALNT3Q14435 633 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 QPCTQ16769 361 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 CCDC38Q502W7 563 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 FNBP1LQ5T0N5 605 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 LYPLAL1Q5VWZ2 237 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 ZNF534Q76KX8 674 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 TRMT10CQ7L0Y3 403 aaKnown RBP13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 CDH24Q86UP0 819 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 PALM2Q8IXS6 379 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 TMEM102Q8N9M5 508 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 PEX13Q92968 403 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 C9orf72Q96LT7 481 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 NSMCE3Q96MG7 304 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 FCRL4Q96PJ5 515 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 LYSMD1Q96S90 227 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 SAYSD1Q9NPB0 183 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 OSGIN2Q9Y236 505 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 MAD1L1Q9Y6D9 718 aa13.22□□□□□ -0.29
RAPGEF1-204ENST00000414781 KLHL41O60662 606 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 AVILO75366 819 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 C9P02748 559 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 ALPPP05187 535 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 POLBP06746 335 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 GSTA2P09210 222 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 SLC2A4P14672 509 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 ZNF30P17039 623 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 TPH1P17752 444 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 MGAT1P26572 445 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 TEAD1P28347 426 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 CHRNA4P43681 627 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 CDK3Q00526 305 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 NFATC2Q13469 925 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 ACOX1Q15067 660 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 TAF1AQ15573 450 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms