RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ZNF768Q9H5H4 540 aaKnown RBP14.31□□□□□ -0.12
CHD1-202ENST00000414220 FBXO8Q9NRD0 319 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 FBXO5Q9UKT4 447 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 CHMP2BQ9UQN3 213 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 PCDHGA3Q9Y5H0 932 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 ACACBO00763 2458 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 A0A087WV48 116 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 A0A1W2PNU3 283 aaPredicted RBP14.3□□□□□ -0.12
CHD1-202ENST00000414220 GSAPA4D1B5 854 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 TLCD2A6NGC4 264 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 C2orf74A8MZ97 194 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 BHMG1C9JSJ3 638 aaPredicted RBP14.3□□□□□ -0.12
CHD1-202ENST00000414220 EIF3HO15372 352 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHD1-202ENST00000414220 TLX3O43711 291 aaPredicted RBP14.3□□□□□ -0.12
CHD1-202ENST00000414220 S1PR4O95977 384 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 FGF3P11487 239 aaPredicted RBP14.3□□□□□ -0.12
CHD1-202ENST00000414220 CCL4P13236 92 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 POLR2CP19387 275 aaPredicted RBP14.3□□□□□ -0.12
CHD1-202ENST00000414220 CDH3P22223 829 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 CCNFP41002 786 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 SLC1A2P43004 574 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 ABCG1P45844 678 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 SEPHS1P49903 392 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 UCNP55089 124 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 MC2RQ01718 297 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 FOXM1Q08050 763 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 ILF2Q12905 390 aaKnown RBP14.3□□□□□ -0.12
CHD1-202ENST00000414220 ABRQ12979 859 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 MSS51Q4VC12 460 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 XKR5Q6UX68 686 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 BPHLQ86WA6 291 aaPredicted RBP14.3□□□□□ -0.12
CHD1-202ENST00000414220 DCUN1D3Q8IWE4 304 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 DENND6AQ8IWF6 608 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 ZBTB2Q8N680 514 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 SIDT2Q8NBJ9 832 aaKnown RBP14.3□□□□□ -0.12
CHD1-202ENST00000414220 PYROXD1Q8WU10 500 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 JPH3Q8WXH2 748 aaPredicted RBP14.3□□□□□ -0.12
CHD1-202ENST00000414220 ART4Q93070 314 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 RAD51AP1Q96B01 352 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 BIRC8Q96P09 236 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 TRIM56Q9BRZ2 755 aaKnown RBP14.3□□□□□ -0.12
CHD1-202ENST00000414220 RAB11FIP5Q9BXF6 653 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 FBXO6Q9NRD1 293 aaPredicted RBP14.3□□□□□ -0.12
CHD1-202ENST00000414220 LATS2Q9NRM7 1088 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 WDR70Q9NW82 654 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 NSMCE4AQ9NXX6 385 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 IL1RAPL1Q9NZN1 696 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 OR6C2Q9NZP2 312 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 KLHL42Q9P2K6 505 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 SLC39A10Q9ULF5 831 aa14.3□□□□□ -0.12
CHD1-202ENST00000414220 CEP295Q9C0D2 2601 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 CTAGE15A4D2H0 777 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 NIPSNAP2O75323 286 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 VPS26AO75436 327 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 CTAGE8P0CG41 777 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 ERVK-10P10266 1014 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 ATP5DP30049 168 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 SKIV2L2P42285 1042 aaKnown RBP14.29□□□□□ -0.12
CHD1-202ENST00000414220 LEPRP48357 1165 aaKnown RBP14.29□□□□□ -0.12
CHD1-202ENST00000414220 CARSP49589 748 aaKnown RBP14.29□□□□□ -0.12
CHD1-202ENST00000414220 ACY1Q03154 408 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 CTSL3PQ5NE16 218 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 HP1BP3Q5SSJ5 553 aaPredicted RBP14.29□□□□□ -0.12
CHD1-202ENST00000414220 DUPD1Q68J44 220 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 CEP128Q6ZU80 1094 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 CTAGE6Q86UF2 777 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 CTAGE4Q8IX94 777 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 ZBED8Q8IZ13 594 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 AGGF1Q8N302 714 aaeCLIP14.29□□□□□ -0.12
CHD1-202ENST00000414220 C2CD4AQ8NCU7 369 aaPredicted RBP14.29□□□□□ -0.12
CHD1-202ENST00000414220 FBXO36Q8NEA4 188 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 OR5AR1Q8NGP9 310 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 LKAAEAR1Q8TD35 194 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 KLHL6Q8WZ60 621 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 KCNJ9Q92806 393 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 SLC22A18Q96BI1 424 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 NAF1Q96HR8 494 aaKnown RBP14.29□□□□□ -0.12
CHD1-202ENST00000414220 PDE7BQ9NP56 450 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 C1GALT1Q9NS00 363 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 OCIAD1Q9NX40 245 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 ACSL6Q9UKU0 697 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 TEX264Q9Y6I9 313 aa14.29□□□□□ -0.12
CHD1-202ENST00000414220 PIPSLA2A3N6 862 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 STMND1H3BQB6 276 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 KLK10O43240 276 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 PRAMEF10O60809 474 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 BANF1O75531 89 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 ZBTB11O95625 1053 aaPredicted RBP14.28□□□□□ -0.12
CHD1-202ENST00000414220 LIPCP11150 499 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 ENO3P13929 434 aaPredicted RBP14.28□□□□□ -0.12
CHD1-202ENST00000414220 NELFEP18615 380 aaKnown RBP14.28□□□□□ -0.12
CHD1-202ENST00000414220 ETV5P41161 510 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 ATP1A2P50993 1020 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 PLTPP55058 493 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 HSD11B2P80365 405 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 MRPS25P82663 173 aaKnown RBP14.28□□□□□ -0.12
CHD1-202ENST00000414220 FRG1Q14331 258 aaKnown RBP14.28□□□□□ -0.12
CHD1-202ENST00000414220 IL11RAQ14626 422 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 LRRC8EQ6NSJ5 796 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 UNC5AQ6ZN44 842 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms