RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 UMODP07911 640 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 SLC35G4P0C7Q5 338 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 TMEM253P0C7T8 217 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 CBSLP0DN79 551 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 PVRP15151 417 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 UGT1A6P19224 532 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 UGT1A1P22309 533 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 UGT1A4P22310 534 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 NDUFS1P28331 727 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 PTGER4P35408 488 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 CBSP35520 551 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 PDK2Q15119 407 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 NOMO1Q15155 1222 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 HADHQ16836 314 aaKnown RBP9.25□□□□□ -0.93
RFFL-203ENST00000413582 FNBP1LQ5T0N5 605 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 FAM151BQ6UXP7 276 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 CDHR3Q6ZTQ4 885 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 GDF7Q7Z4P5 450 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 KIAA1328Q86T90 577 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 FJX1Q86VR8 437 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 RHOT2Q8IXI1 618 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 PLD5Q8N7P1 536 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 KCTD6Q8NC69 237 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 ACRBPQ8NEB7 543 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 OR4E2Q8NGC2 313 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 OR2L2Q8NH16 312 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 SPATA22Q8NHS9 363 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 NAT14Q8WUY8 206 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 FAR1Q8WVX9 515 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 CTNNBL1Q8WYA6 563 aaPredicted RBP9.25□□□□□ -0.93
RFFL-203ENST00000413582 AGAP3Q96P47 875 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 GBP5Q96PP8 586 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 SRPK1Q96SB4 655 aaKnown RBP9.25□□□□□ -0.93
RFFL-203ENST00000413582 SLX1AQ9BQ83 275 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 C17orf62Q9BQA9 187 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 KLHL25Q9H0H3 589 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 RUBCNLQ9H714 662 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 UGT1A7Q9HAW7 530 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 UGT1A10Q9HAW8 530 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 UGT1A8Q9HAW9 530 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 COPG2Q9UBF2 871 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 SERTAD3Q9UJW9 196 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 SPG11Q96JI7 2443 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 GLYATL1P3A0A0U1RQE8 302 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 A0A1B0GUH1 482 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 BTN3A3O00478 584 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 BTN3A1O00481 513 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 PMPCBO75439 489 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 HBQ1P09105 142 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 PRDX3P30048 256 aaKnown RBP9.24□□□□□ -0.93
RFFL-203ENST00000413582 HADHBP55084 474 aaKnown RBP9.24□□□□□ -0.93
RFFL-203ENST00000413582 TAS2R40P59535 323 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 AIMP2Q13155 320 aaKnown RBP9.24□□□□□ -0.93
RFFL-203ENST00000413582 ART3Q13508 389 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 ITGA9Q13797 1035 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 ZNF169Q14929 603 aaPredicted RBP9.24□□□□□ -0.93
RFFL-203ENST00000413582 SLC9A5Q14940 896 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 PPP2R5EQ16537 467 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 CYP2A13Q16696 494 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 LONRF2Q1L5Z9 754 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 KRTAP21-3Q3LHN1 58 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 ZFYVE27Q5T4F4 411 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 C1orf189Q5VU69 101 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 MLIPQ5VWP3 458 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 ZDHHC20Q5W0Z9 365 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 B3GNTL1Q67FW5 361 aaPredicted RBP9.24□□□□□ -0.93
RFFL-203ENST00000413582 RHBDD2Q6NTF9 364 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 IGFL2Q6UWQ7 119 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 DET1Q7L5Y6 550 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 DAAM2Q86T65 1068 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 LILRA3Q8N6C8 439 aaPredicted RBP9.24□□□□□ -0.93
RFFL-203ENST00000413582 ACVR1CQ8NER5 493 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 PROKR1Q8TCW9 393 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 COG1Q8WTW3 980 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 ITLN2Q8WWU7 325 aaPredicted RBP9.24□□□□□ -0.93
RFFL-203ENST00000413582 OLFM3Q96PB7 478 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 NRTNQ99748 197 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 DESI2Q9BSY9 194 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 SRMSQ9H3Y6 488 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 TRABDQ9H4I3 376 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 ATP13A2Q9NQ11 1180 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 IL17CQ9P0M4 197 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 FAM8A1Q9UBU6 413 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 LCMT1Q9UIC8 334 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 FBXL4Q9UKA2 621 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 ACSL5Q9ULC5 683 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 CDYLQ9Y232 598 aa9.24□□□□□ -0.93
RFFL-203ENST00000413582 KLF2Q9Y5W3 355 aaPredicted RBP9.24□□□□□ -0.93
RFFL-203ENST00000413582 CCDC66A2RUB6 948 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 KLHL33A6NCF5 533 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 AGPSO00116 658 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 MYO1FO00160 1098 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 HCRTR1O43613 425 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 SGTAO43765 313 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 ALOX12BO75342 701 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 AKT1P31749 480 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 ARHGAP25P42331 645 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 GABRA4P48169 554 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 OTUD4Q01804 1114 aaKnown RBP9.23□□□□□ -0.93
RFFL-203ENST00000413582 AP1B1Q10567 949 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms