RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CNIH3Q8TBE1 160 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 RMDN1Q96DB5 314 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 FUBP3Q96I24 572 aaKnown RBP eCLIP17.3■□□□□ 0.363e-11■■■■■ 48.5
SDCBP-202ENST00000413219 PSKH2Q96QS6 385 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 DPY30Q9C005 99 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 KAT8Q9H7Z6 458 aaKnown RBP17.3■□□□□ 0.36
SDCBP-202ENST00000413219 CCNB1IP1Q9NPC3 277 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 ERVK-18Q9QC07 812 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 PMF1-BGLAPU3KQ54 211 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 E5RI56 91 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 IGLV3-27P01718 113 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 S100BP04271 92 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-202ENST00000413219 IGFBP5P24593 272 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 CD6P30203 668 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 MAGEA2P43356 314 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 ST13P50502 369 aaKnown RBP17.29■□□□□ 0.36
SDCBP-202ENST00000413219 RPL38P63173 70 aaKnown RBP17.29■□□□□ 0.36
SDCBP-202ENST00000413219 MTA1Q13330 715 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 AAK1Q2M2I8 961 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 INAVAQ3KP66 663 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 B3GNT8Q7Z7M8 397 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 NAT16Q8N8M0 369 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 NUDT8Q8WV74 236 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 HPS1Q92902 700 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 NCLNQ969V3 563 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 PYURFQ96I23 114 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 MS4A4AQ96JQ5 239 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 BTBD2Q9BX70 525 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 ASPSCR1Q9BZE9 553 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 CLMPQ9H6B4 373 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 ABI2Q9NYB9 513 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-202ENST00000413219 IL37Q9NZH6 218 aa17.29■□□□□ 0.36
SDCBP-202ENST00000413219 ISPDA4D126 451 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 TTC34A8MYJ7 566 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 OR1I1O60431 355 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 ERN1O75460 977 aaKnown RBP17.28■□□□□ 0.36
SDCBP-202ENST00000413219 PGRP06401 933 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 CNPP09543 421 aaKnown RBP17.28■□□□□ 0.36
SDCBP-202ENST00000413219 GSTT2P0CG29 244 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 GSTT2BP0CG30 244 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 PFKLP17858 780 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 MC4RP32245 332 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 PTGER3P43115 390 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 VAC14Q08AM6 782 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 FADDQ13158 208 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 CLCA4Q14CN2 919 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 CACHD1Q5VU97 1274 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 MILR1Q7Z6M3 343 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 ABI1Q8IZP0 508 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 STARD8Q92502 1023 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 TRIB2Q92519 343 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 SLX1AQ9BQ83 275 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 SP140LQ9H930 580 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 SPC25Q9HBM1 224 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 EXD2Q9NVH0 621 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 C1orf109Q9NX04 203 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 CCL15-CCL14A0A0B4J2E2 113 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 WDR47O94967 919 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 FTH1P02794 183 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 ITGB1P05556 798 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 OR4Q2P0C623 313 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 PABPC1P11940 636 aaKnown RBP17.28■□□□□ 0.36
SDCBP-202ENST00000413219 HOXD9P28356 352 aaPredicted RBP17.28■□□□□ 0.36
SDCBP-202ENST00000413219 CD40LGP29965 261 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 CLCN7P51798 805 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 PPP5CP53041 499 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 PURAQ00577 322 aaKnown RBP17.28■□□□□ 0.36
SDCBP-202ENST00000413219 RING1Q06587 406 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 PTGR1Q14914 329 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 CCL15Q16663 113 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 FAM110CQ1W6H9 321 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 DEPDC1Q5TB30 811 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 CPZQ66K79 652 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 CYP2U1Q7Z449 544 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 STK40Q8N2I9 435 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 RHOXF1Q8NHV9 184 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 HBEGFQ99075 208 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 TBCDQ9BTW9 1192 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 MAGEH1Q9H213 219 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 EPS8L2Q9H6S3 715 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 IPPKQ9H8X2 491 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 CPNE5Q9HCH3 593 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 THG1LQ9NWX6 298 aaKnown RBP17.28■□□□□ 0.36
SDCBP-202ENST00000413219 MARCH2Q9P0N8 246 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 FKBPLQ9UIM3 349 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 DHRS7Q9Y394 339 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 PCDHB14Q9Y5E9 798 aa17.28■□□□□ 0.36
SDCBP-202ENST00000413219 GOLGA8CPA6NN73 597 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 RAD51BO15315 384 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 INSIG1O15503 277 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 GLUD1P00367 558 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 SERPINA1P01009 418 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 PRLP01236 227 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 GZMMP51124 257 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 HNRNPFP52597 415 aaKnown RBP17.27■□□□□ 0.36
SDCBP-202ENST00000413219 VBP1P61758 197 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 NFE2Q16621 373 aaPredicted RBP17.27■□□□□ 0.36
SDCBP-202ENST00000413219 SPANXN4Q5MJ08 99 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 SDHAF4Q5VUM1 108 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 SBSNQ6UWP8 590 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms