RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 GFYI3L273 518 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 GPR39O43194 453 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 HNRNPRO43390 633 aaKnown RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 NFATC1O95644 943 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 PRNPP04156 253 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 ADH5P11766 374 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 IL10P22301 178 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 PRPH2P23942 346 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 SLC6A2P23975 617 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 MAPK1P28482 360 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 AKT1P31749 480 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 GNPDA1P46926 289 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 DIO3P55073 304 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 NFYCQ13952 458 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 DHCR24Q15392 516 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 SLC5A9Q2M3M2 681 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 AP5B1Q2VPB7 878 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 MTX3Q5HYI7 312 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 CACHD1Q5VU97 1274 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 PTCRAQ6ISU1 281 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 TMEM154Q6P9G4 183 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 UBE2R2Q712K3 238 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 CYP2U1Q7Z449 544 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 PROSER1Q86XN7 944 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 SLC15A3Q8IY34 581 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 TNIP2Q8NFZ5 429 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 LKAAEAR1Q8TD35 194 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 USP7Q93009 1102 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 METTL2AQ96IZ6 378 aaKnown RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 SH3GL1Q99961 368 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 TMEM79Q9BSE2 394 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 APOL5Q9BWW9 433 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 ARL15Q9NXU5 204 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 SNX6Q9UNH7 406 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 TMED5Q9Y3A6 229 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 A0A0U1RQS6 177 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 FXYD1O00168 92 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 NRG2O14511 850 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 AP1G1O43747 822 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 BNIP3LO60238 219 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 LEFTY1O75610 366 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 GUCA1CO95843 209 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 IL6P05231 212 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 CISD3P0C7P0 127 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 TIMP2P16035 220 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 EPCAMP16422 314 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 ITGB6P18564 788 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 HTR1EP28566 365 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 CCR7P32248 378 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 B4GALNT1Q00973 533 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 ELP6Q0PNE2 266 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 HYAL1Q12794 435 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 TLR1Q15399 786 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 FXNQ16595 210 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 PHKG1Q16816 387 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 C6orf10Q5SRN2 563 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 HENMT1Q5T8I9 393 aaKnown RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 LPCAT4Q643R3 524 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 ZNF765Q7L2R6 523 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 GRASPQ7Z6J2 395 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 RBM23Q86U06 439 aaKnown RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 NLRP8Q86W28 1048 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 HID1Q8IV36 788 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 RASGRP3Q8IV61 690 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 SPNS2Q8IVW8 549 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 KLHDC8AQ8IYD2 350 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 SFRP1Q8N474 314 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 MARVELD2Q8N4S9 558 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 PACRGLQ8N7B6 248 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 CHST14Q8NCH0 376 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 TMIEQ8NEW7 156 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 OR2T11Q8NH01 316 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 PROKR1Q8TCW9 393 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 SLC45A3Q96JT2 553 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 ACOX2Q99424 681 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 OSBPL6Q9BZF3 934 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 ZCCHC2Q9C0B9 1178 aaKnown RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 FAM192AQ9GZU8 254 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 LINC00597Q9H2U6 94 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 PIDD1Q9HB75 910 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 CCM2LQ9NUG4 571 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 DUS2Q9NX74 493 aaKnown RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 ELOVL2Q9NXB9 296 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 PTGDR2Q9Y5Y4 395 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 CUL9Q8IWT3 2517 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 NME4O00746 187 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 SLCO2B1O94956 709 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 PRPS2P11908 318 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 PSMA4P25789 261 aaKnown RBP13.28□□□□□ -0.28
LIMS1-205ENST00000410093 NRIP1P48552 1158 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 HNRNPFP52597 415 aaKnown RBP13.28□□□□□ -0.28
LIMS1-205ENST00000410093 PCDH1Q08174 1060 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 BOP1Q14137 746 aaKnown RBP13.28□□□□□ -0.28
LIMS1-205ENST00000410093 IMPG1Q17R60 797 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 SFT2D3Q587I9 215 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 ARSIQ5FYB1 569 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 CYP20A1Q6UW02 462 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 FKBP9P1Q75LS8 142 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 TECPR1Q7Z6L1 1165 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 RNF148Q8N7C7 305 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms