RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PRORSD1PA6NEY8 169 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 HTR2BP41595 481 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 DEFA5Q01523 94 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 ABHD18Q0P651 414 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 LAPTM5Q13571 262 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 KCNJ8Q15842 424 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 PPP2R2DQ66LE6 453 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 HJURPQ8NCD3 748 aaPredicted RBP17.37■□□□□ 0.37
SMPD4-202ENST00000409031 COPS8Q99627 209 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 LHPPQ9H008 270 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 TBC1D17Q9HA65 648 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 TM9SF3Q9HD45 589 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 SEMA3GQ9NS98 782 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 DNAJC11Q9NVH1 559 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 ATPIF1Q9UII2 106 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 AGO1Q9UL18 857 aaKnown RBP17.37■□□□□ 0.37
SMPD4-202ENST00000409031 CLEC4AQ9UMR7 237 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 CCL22O00626 93 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 POMCP01189 267 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 CXCR2P25025 360 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 CDH5P33151 784 aaPredicted RBP17.37■□□□□ 0.37
SMPD4-202ENST00000409031 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMPD4-202ENST00000409031 NANOGP8Q6NSW7 305 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 PEG10Q86TG7 708 aaKnown RBP17.37■□□□□ 0.37
SMPD4-202ENST00000409031 PQLC3Q8N755 202 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 MSANTD3Q96H12 275 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 PIWIL1Q96J94 861 aaKnown RBP17.37■□□□□ 0.37
SMPD4-202ENST00000409031 HERPUD2Q9BSE4 406 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 CCDC32Q9BV29 185 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 NANOGQ9H9S0 305 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 TMPRSS4Q9NRS4 437 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 CMAHPQ9Y471 501 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 SLC28A2O43868 658 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 KERAO60938 352 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 CSF2P04141 144 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 POLR2LP62875 67 aaKnown RBP17.37■□□□□ 0.37
SMPD4-202ENST00000409031 FAM220AQ7Z4H9 259 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 JPH3Q8WXH2 748 aaPredicted RBP17.37■□□□□ 0.37
SMPD4-202ENST00000409031 KCNC2Q96PR1 638 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 DPAGT1Q9H3H5 408 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 C11orf16Q9NQ32 467 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 MIOSQ9NXC5 875 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 H7C2Y5 167 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 CHRM5P08912 532 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-202ENST00000409031 BUD31P41223 144 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-202ENST00000409031 DGKQP52824 942 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 NUDT6P53370 316 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 KRT77Q7Z794 578 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 NTAN1Q96AB6 310 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 MYRFLQ96LU7 910 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 DHRS4Q9BTZ2 278 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 FBXW11Q9UKB1 542 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 ZNF879B4DU55 563 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 INMT-MINDY4F8WBC2 141 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 QSOX1O00391 747 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 AP1G1O43747 822 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 XYLBO75191 536 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 HDCP19113 662 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 YBEYP58557 167 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-202ENST00000409031 ARHGEF6Q15052 776 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 TMEM44Q2T9K0 475 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 UBE2R2Q712K3 238 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-202ENST00000409031 PM20D2Q8IYS1 436 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 TMEM199Q8N511 208 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 TXNDC5Q8NBS9 432 aaKnown RBP17.36■□□□□ 0.37
SMPD4-202ENST00000409031 NDRG1Q92597 394 aaKnown RBP17.36■□□□□ 0.37
SMPD4-202ENST00000409031 ESAMQ96AP7 390 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 SNX27Q96L92 541 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 FAIM2Q9BWQ8 316 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 POLR3BQ9NW08 1133 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-202ENST00000409031 ERVK-18Q9QC07 812 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 RIMS3Q9UJD0 308 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 MYH15Q9Y2K3 1946 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 FAM86C2PA6NEL3 165 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 KPNA6O60684 536 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 ESR1P03372 595 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 PLA2G16P53816 162 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 DSC2Q02487 901 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 CSTF1Q05048 431 aaKnown RBP17.36■□□□□ 0.37
SMPD4-202ENST00000409031 CLCA4Q14CN2 919 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 NBPF12Q5TAG4 269 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-202ENST00000409031 PNCKQ6P2M8 343 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 LGI4Q8N135 537 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 BRSK1Q8TDC3 778 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 SLC39A8Q9C0K1 460 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 FAM83DQ9H4H8 585 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 FAM118AQ9NWS6 357 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 KCTD5Q9NXV2 234 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 MT-ND2P03891 347 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 CYP2B6P20813 491 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 SLC39A12Q504Y0 691 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 HSD17B12Q53GQ0 312 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 OLFML2AQ68BL7 652 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 ADNP2Q6IQ32 1131 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 PGM2L1Q6PCE3 622 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 DPY19L3Q6ZPD9 716 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 CMTR2Q8IYT2 770 aaKnown RBP17.36■□□□□ 0.37
SMPD4-202ENST00000409031 MFSD2AQ8NA29 543 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 FTHL17Q9BXU8 183 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 GLIS2Q9BZE0 524 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms