RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 EFHD2Q96C19 240 aaPredicted RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 DCBLD2Q96PD2 775 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 FCRL5Q96RD9 977 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 TPSD1Q9BZJ3 242 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 FAM117AQ9C073 453 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 KCNF1Q9H3M0 494 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 NOL11Q9H8H0 719 aaKnown RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 HRASLS2Q9NWW9 162 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 TRIM24O15164 1050 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 CNMDO75829 334 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 KIR3DL1P43629 444 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 PPIDQ08752 370 aaKnown RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 CBX3Q13185 183 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 KLHL12Q53G59 568 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 KCTD8Q6ZWB6 473 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 MTDHQ86UE4 582 aaKnown RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 OR5L2Q8NGL0 311 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 RC3H2Q9HBD1 1191 aaKnown RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 Q9N2J8 555 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 A0A1W2PQU0 124 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 PIRO00625 290 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 IL6P05231 212 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 PRPS2P11908 318 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 TYRP1P17643 537 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 ADSLP30566 484 aaPredicted RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 RASGEF1BQ0VAM2 473 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 IL1RAPQ9NPH3 570 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 MKKSQ9NPJ1 570 aaPredicted RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 ARHGEF3Q9NR81 526 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 SH3GLB1Q9Y371 365 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 MYH3P11055 1940 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 PTX3P26022 381 aaPredicted RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 GNALP38405 381 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 ARSFP54793 590 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 GYS2P54840 703 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 DMPKQ09013 629 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 MLF2Q15773 248 aaPredicted RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 DPYSL2Q16555 572 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 HSF5Q4G112 596 aaPredicted RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 PDCD4Q53EL6 469 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 SLC44A4Q53GD3 710 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 RNF43Q68DV7 783 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 CXXC5Q7LFL8 322 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 RBM12BQ8IXT5 1001 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 ZNF366Q8N895 744 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 CLEC1AQ8NC01 280 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 APOLD1Q96LR9 279 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 FAM192AQ9GZU8 254 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 CCNB1IP1Q9NPC3 277 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 RGSL1A5PLK6 1076 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 DHX15O43143 795 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 OAS1P00973 400 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 THEGLP0DJG4 465 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 KCNA3P22001 575 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 OTX2P32243 289 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 VHLP40337 213 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 PLA2G16P53816 162 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 RING1Q06587 406 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 PTP4A2Q12974 167 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 SLC9B1Q4ZJI4 515 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 IZUMO1Q8IYV9 350 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 USP29Q9HBJ7 922 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 SPAG4Q9NPE6 437 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 STON1Q9Y6Q2 735 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 KAT6AQ92794 2004 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 PMM2O15305 246 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 PRKCGP05129 697 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 STAT5AP42229 794 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 HSPA7P48741 367 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 AP1S2P56377 157 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 LRRC26Q2I0M4 334 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 THAP5Q7Z6K1 395 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 MRPL10Q7Z7H8 261 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 UBALD2Q8IYN6 164 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 ZSCAN4Q8NAM6 433 aaPredicted RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 HNRNPLLQ8WVV9 542 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 CKAP2Q8WWK9 683 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 XAGE5Q8WWM1 108 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 NAT6Q93015 286 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 MYDGFQ969H8 173 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 SGIP1Q9BQI5 828 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 C1orf50Q9BV19 199 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 ASPNQ9BXN1 380 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 CHMP1AQ9HD42 196 aaPredicted RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 ZNF282Q9UDV7 671 aaPredicted RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 CIDEBQ9UHD4 219 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 KCNK6Q9Y257 313 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 LEFTY1O75610 366 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 RFPL2O75678 378 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 FHP07954 510 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 DRD4P21917 467 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 ATXN1P54253 815 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 TRIQKQ629K1 86 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 CUZD1Q86UP6 607 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 PYROXD2Q8N2H3 581 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 NIPA2Q8N8Q9 360 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 ATXN2LQ8WWM7 1075 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 CPNE2Q96FN4 548 aaPredicted RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 ZSWIM3Q96MP5 696 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 MRPS26Q9BYN8 205 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms