RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 APOL3O95236 402 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 C4BPAP04003 597 aaKnown RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ACADMP11310 421 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ETS1P14921 441 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CYP2A7P20853 494 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 GCAP28676 217 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 SSTR1P30872 391 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 PTGER3P43115 390 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CCR5P51681 352 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 PGDP52209 483 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 YWHAGP61981 247 aaKnown RBP eCLIP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 OVGP1Q12889 678 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 RSBN1LQ6PCB5 846 aaPredicted RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 KIAA0408Q6ZU52 694 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CHSY1Q86X52 802 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 TMC8Q8IU68 726 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 MINDY1Q8N5J2 469 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ASCC1Q8N9N2 400 aaKnown RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 FBXO36Q8NEA4 188 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 RSC1A1Q92681 617 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 VRK1Q99986 396 aaPredicted RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 MARK1Q9P0L2 795 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC9A2Q9UBY0 812 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 TBC1D30Q9Y2I9 924 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ADGRA2Q96PE1 1338 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC16A6O15403 523 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 SEC14L5O43304 696 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 RPP40O75818 363 aaKnown RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 MLYCDO95822 493 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 TPOP07202 933 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CD3GP09693 182 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 T-ENOLP0DO92 83 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 PGM1P36871 562 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CLCNKBP51801 687 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 RPL7AP62424 266 aaKnown RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF200P98182 395 aaPredicted RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 SP4Q02446 784 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 INPP5AQ14642 412 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 PDK2Q15119 407 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 LRRC36Q1X8D7 754 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 TUSC1Q2TAM9 212 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF311Q5JNZ3 666 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 BHLHB9Q6PI77 547 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ZBTB33Q86T24 672 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 GRPEL2Q8TAA5 225 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ACTL9Q8TC94 416 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 LRRN4Q8WUT4 740 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CLEC4DQ8WXI8 215 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 DCPSQ96C86 337 aaKnown RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 EAF1Q96JC9 268 aaPredicted RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ZFRQ96KR1 1074 aaKnown RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC6A15Q9H2J7 730 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 OPA3Q9H6K4 179 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 PXMP2Q9NR77 195 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ARL8BQ9NVJ2 186 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF212Q9UDV6 495 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ANAPC2Q9UJX6 822 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 E9PI62 339 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 H0Y8G0 127 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 GSC2O15499 205 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CST8O60676 142 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CCNE2O96020 404 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 HNRNPLP14866 589 aaKnown RBP eCLIP6.48□□□□□ -1.378e-10■■□□□ 13
TM9SF4-202ENST00000398022 ACO1P21399 889 aaKnown RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 NNMTP40261 264 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CREMQ03060 361 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 SPP2Q13103 211 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 NOGQ13253 232 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 MADCAM1Q13477 382 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 TBCCQ15814 346 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ETFDHQ16134 617 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 FAM83EQ2M2I3 478 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 RIPPLY2Q5TAB7 128 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 FKBP1CQ5VVH2 108 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ANKS6Q68DC2 871 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 LRRC74BQ6ZQY2 392 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CTAGE3PQ8IX95 158 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 FIBCD1Q8N539 461 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 PCDH20Q8N6Y1 951 aaKnown RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 OR8K5Q8NH50 307 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 UBA3Q8TBC4 463 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 HASPINQ8TF76 798 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 APBB2Q92870 758 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 OTUB2Q96DC9 234 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 MTG1Q9BT17 334 aaPredicted RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 C1QTNF3Q9BXJ4 246 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CADM1Q9BY67 442 aaKnown RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 WWP1Q9H0M0 922 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 LRRC40Q9H9A6 602 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CYP3A43Q9HB55 503 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 KLHL1Q9NR64 748 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 TDP1Q9NUW8 608 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 ELOVL2Q9NXB9 296 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 CTSFQ9UBX1 484 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 SRRDQ9UH36 339 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 DAPK2Q9UIK4 370 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 OGDHLQ9ULD0 1010 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 RPH3ALQ9UNE2 315 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 PCDHGB2Q9Y5G2 931 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 PCDHGB1Q9Y5G3 927 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms