RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PNPOQ9NVS9 261 aa19.02■□□□□ 0.63
PDLIM2-205ENST00000397761 ARL15Q9NXU5 204 aa19.02■□□□□ 0.63
PDLIM2-205ENST00000397761 UBFD1O14562 309 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 ZNF195O14628 629 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 HIST1H2AGP0C0S8 130 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 HIST1H2ADP20671 130 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 MPSTP25325 297 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 HNMTP50135 292 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 RPL14P50914 215 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 CLCNKAP51800 687 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 LCP2Q13094 533 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 ZXDCQ2QGD7 858 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 USP39Q53GS9 565 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 RPS27LQ71UM5 84 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 CHST15Q7LFX5 561 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 KIRREL3Q8IZU9 778 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 SLC22A18ASQ8N1D0 253 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 OR13H1Q8NG92 308 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 RFWD2Q8NHY2 731 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 PDXPQ96GD0 296 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 HIST1H2AHQ96KK5 128 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 HIST1H2AJQ99878 128 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 H2AFJQ9BTM1 129 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 PNMA8BQ9ULN7 279 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 ARL2BPQ9Y2Y0 163 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 DGKBQ9Y6T7 804 aa19.01■□□□□ 0.63
PDLIM2-205ENST00000397761 C1orf105O95561 183 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 GUCA1CO95843 209 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 ACP5P13686 325 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 SLC6A12P48065 614 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 CLCQ05315 142 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 LRP8Q14114 963 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 CAPRIN2Q6IMN6 1127 aaKnown RBP19■□□□□ 0.63
PDLIM2-205ENST00000397761 ENPP7Q6UWV6 458 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 MBOAT1Q6ZNC8 495 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 WDR75Q8IWA0 830 aaKnown RBP19■□□□□ 0.63
PDLIM2-205ENST00000397761 FBXL8Q96CD0 374 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 RMDN2Q96LZ7 410 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 NSUN5Q96P11 429 aaKnown RBP19■□□□□ 0.63
PDLIM2-205ENST00000397761 EGFL8Q99944 293 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 CD244Q9BZW8 370 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 CARS2Q9HA77 564 aaKnown RBP19■□□□□ 0.63
PDLIM2-205ENST00000397761 ZBTB26Q9HCK0 441 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 KLC4Q9NSK0 619 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 SPATA6Q9NWH7 488 aaPredicted RBP19■□□□□ 0.63
PDLIM2-205ENST00000397761 KCNK4Q9NYG8 393 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 EIF2B4Q9UI10 523 aaKnown RBP19■□□□□ 0.63
PDLIM2-205ENST00000397761 ZDHHC2Q9UIJ5 367 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 ST14Q9Y5Y6 855 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 SLCO1B1Q9Y6L6 691 aa19■□□□□ 0.63
PDLIM2-205ENST00000397761 SPTY2D1-AS1A0A0U1RR47 76 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 MYO1CO00159 1063 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 MATN2O00339 956 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 GNPDA1P46926 289 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 CDH13P55290 713 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 RPL6Q02878 288 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 DMWDQ09019 674 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 PTK2BQ14289 1009 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 ALG11Q2TAA5 492 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 C18orf21Q32NC0 220 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 CUZD1Q86UP6 607 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 KLHDC8AQ8IYD2 350 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 C1orf216Q8TAB5 229 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 STON2Q8WXE9 905 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 THOC1Q96FV9 657 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 CCDC138Q96M89 665 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 PLCD4Q9BRC7 762 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 TRNAU1APQ9NX07 287 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 WWOXQ9NZC7 414 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 KLQ9UEF7 1012 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 MARCOQ9UEW3 520 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 INVSQ9Y283 1065 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 USH1CQ9Y6N9 552 aa18.99■□□□□ 0.63
PDLIM2-205ENST00000397761 A0A1W2PR77 199 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 MLYCDO95822 493 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 FGF4P08620 206 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 BCKDHBP21953 392 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 MAP4P27816 1152 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 SRP54P61011 504 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 SH3BP2P78314 561 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 FBXO48Q5FWF7 155 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 MAVSQ7Z434 540 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 IQCHQ86VS3 1027 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 DCP2Q8IU60 420 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 MFSD2AQ8NA29 543 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 SPDYE1Q8NFV5 336 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 CFAP61Q8NHU2 1237 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 AGAP11Q8TF27 550 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 ESAMQ96AP7 390 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 ZNF382Q96SR6 550 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 DUSP15Q9H1R2 295 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 STN1Q9H668 368 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 TNFRSF12AQ9NP84 129 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 DCTN4Q9UJW0 460 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 PLEKHM1Q9Y4G2 1056 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 GPSM3Q9Y4H4 160 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 CACNA1EQ15878 2313 aa18.98■□□□□ 0.63
PDLIM2-205ENST00000397761 TMEM221A6NGB7 291 aa18.97■□□□□ 0.63
PDLIM2-205ENST00000397761 SLCO1B7G3V0H7 640 aa18.97■□□□□ 0.63
PDLIM2-205ENST00000397761 M0R296 226 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms