RNA–Protein interactions for RNA: ENST00000396641.6

LRRC3B-201, Transcript of leucine rich repeat containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC3B, Length 1,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3B-201ENST00000396641 SHOX2O60902 331 aaPredicted RBP20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 C1orf105O95561 183 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 RPN2P04844 631 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 CTSEP14091 401 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 NME1P15531 152 aaKnown RBP20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 JUNDP17535 347 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 BGNP21810 368 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 NAA20P61599 178 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 ABRAXAS1Q6UWZ7 409 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 LAYNQ6UX15 382 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 SPDYE1Q8NFV5 336 aaPredicted RBP20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 L3HYPDHQ96EM0 354 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 DNAJC28Q9NX36 388 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 ARL15Q9NXU5 204 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 APOBEC3BQ9UH17 382 aaKnown RBP20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 ASF1AQ9Y294 204 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 SPAG17Q6Q759 2223 aa20.6■□□□□ 0.89
LRRC3B-201ENST00000396641 SDK1Q7Z5N4 2213 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 FAM86C2PA6NEL3 165 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 NCF1BA6NI72 391 aaPredicted RBP20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 SRRM3A6NNA2 597 aaPredicted RBP20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 NCF1CA8MVU1 366 aaPredicted RBP20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 ARHGEF33A8MVX0 844 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 SCAMP1O15126 338 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 GALR2O43603 387 aaPredicted RBP20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 GUCA1CO95843 209 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 NCF1P14598 390 aaPredicted RBP20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 AK4P27144 223 aaPredicted RBP20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 HOXD12P35452 270 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 ACTR1BP42025 376 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 HNMTP50135 292 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 NAGLUP54802 743 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 ACTR1AP61163 376 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 HERVK_113P63132 956 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 TTC23LQ6PF05 361 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 NRROSQ86YC3 692 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 TCAIMQ8N3R3 496 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 PTGR2Q8N8N7 351 aaPredicted RBP20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 RHBDF1Q96CC6 855 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 CCDC138Q96M89 665 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 ERVK-6Q9BXR3 956 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 ERVMER34-1Q9H9K5 563 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 PTBP2Q9UKA9 531 aaKnown RBP20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 PSMD13Q9UNM6 376 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 WDR37Q9Y2I8 494 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 TNPO3Q9Y5L0 923 aaKnown RBP20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 LRP4O75096 1905 aa20.59■□□□□ 0.89
LRRC3B-201ENST00000396641 SERPINB5P36952 375 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 STX3Q13277 289 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 SIM2Q14190 667 aaPredicted RBP20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 SETDB1Q15047 1291 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 ZNF542PQ5EBM4 170 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 ZNF678Q5SXM1 525 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 PEAR1Q5VY43 1037 aaPredicted RBP20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 METTL2BQ6P1Q9 378 aaKnown RBP20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 SYT12Q8IV01 421 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 TBC1D21Q8IYX1 336 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 OR5K2Q8NHB8 316 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 CCL4L1Q8NHW4 92 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 RMDN2Q96LZ7 410 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 EGFL8Q99944 293 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 GATA5Q9BWX5 397 aaPredicted RBP20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 C1QTNF3Q9BXJ4 246 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 TCEAL2Q9H3H9 227 aaPredicted RBP20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 PRDM8Q9NQV8 689 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 TMEM74BQ9NUR3 256 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 TBC1D29Q9UFV1 150 aa20.58■□□□□ 0.89
LRRC3B-201ENST00000396641 PDZK1P1A8MUH7 402 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 TCP11X1B4DZS4 312 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 HALP42357 657 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 CBX1P83916 185 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 BST1Q10588 318 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 ANKRD12Q6UB98 2062 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 RABEPKQ7Z6M1 372 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 SDR16C5Q8N3Y7 309 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 ATL1Q8WXF7 558 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 CHMP6Q96FZ7 201 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 CNDP1Q96KN2 507 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 C12orf66Q96MD2 445 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 ZNF317Q96PQ6 595 aaPredicted RBP20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 TMEM237Q96Q45 408 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 INSM2Q96T92 566 aaPredicted RBP20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 THAP1Q9NVV9 213 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 HEBP2Q9Y5Z4 205 aa20.58■□□□□ 0.88
LRRC3B-201ENST00000396641 TMEM114B3SHH9 223 aa20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 SNUPNO95149 360 aaKnown RBP20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 HNRNPKP61978 463 aaKnown RBP eCLIP20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 CLCA4Q14CN2 919 aa20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 PCBP2Q15366 365 aaKnown RBP eCLIP20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 ELOCQ15369 112 aa20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 CFAP157Q5JU67 520 aa20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 SLC30A9Q6PML9 568 aa20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 ZCCHC23Q6ZST2 131 aa20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 DCUN1D3Q8IWE4 304 aa20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 RAD51AP1Q96B01 352 aa20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 TRIT1Q9H3H1 467 aaKnown RBP20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 SPASTQ9UBP0 616 aa20.57■□□□□ 0.88
LRRC3B-201ENST00000396641 ATXN2Q99700 1313 aaKnown RBP20.56■□□□□ 0.88
LRRC3B-201ENST00000396641 ZFC3H1O60293 1989 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms