RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 BRSK1Q8TDC3 778 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 PPP1R13LQ8WUF5 828 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 ZNF347Q96SE7 839 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 LRRC3Q9BY71 257 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 FZD10Q9ULW2 581 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 GPR25O00155 361 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 FSHRP23945 695 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 OR1D2P34982 312 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 GLUD2P49448 558 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 IL10RBQ08334 325 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 TOMM20Q15388 145 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 CXorf57Q6NSI4 855 aaKnown RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 TAC4Q86UU9 113 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 PYROXD2Q8N2H3 581 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 STOML3Q8TAV4 291 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 GPR152Q8TDT2 470 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 TP53INP1Q96A56 240 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 EMID1Q96A84 441 aaPredicted RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 ASB9Q96DX5 294 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 ANKRA2Q9H9E1 313 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 EVLQ9UI08 416 aaPredicted RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 TESMINQ9Y4I5 508 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 MID1O15344 667 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 STOMP27105 288 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 CORO1AP31146 461 aaKnown RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 DUSP4Q13115 394 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 RBM48Q5RL73 367 aaKnown RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 RAB11FIP2Q7L804 512 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 ATG10Q9H0Y0 220 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 TFB2MQ9H5Q4 396 aaKnown RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 ZNF304Q9HCX3 659 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 PHPT1Q9NRX4 125 aaPredicted RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 IMP3Q9NV31 184 aaKnown RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 AASSQ9UDR5 926 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 RUVBL1Q9Y265 456 aaKnown RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 A0A1B0GVM2 712 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 TCAF2A6NFQ2 919 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 hCG_2039718K7EN88 272 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 EI24O14681 340 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 INSIG1O15503 277 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 PRODHO43272 600 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 AKAP8O43823 692 aaKnown RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 MT-CYBP00156 380 aaPredicted RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 GABRR2P28476 465 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 CD40LGP29965 261 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 DAOAP59103 153 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 ZNF45Q02386 682 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 DPYSL2Q16555 572 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 TBRG1Q3YBR2 411 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 FAM76BQ5HYJ3 339 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 KIAA1324Q6UXG2 1013 aaKnown RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 USP30Q70CQ3 517 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 JAZF1Q86VZ6 243 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 TNFAIP8L1Q8WVP5 186 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 AZIN2Q96A70 460 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 CRELD1Q96HD1 420 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 EQTNQ9NQ60 294 aa10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 MAFBQ9Y5Q3 323 aaPredicted RBP10.1□□□□□ -0.79
LIMCH1-203ENST00000396595 KANTRA0A1W2PQU2 76 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 TSPAN1O60635 241 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 NME6O75414 186 aaPredicted RBP10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 UGT2B4P06133 528 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 C8GP07360 202 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 ANXA8P13928 327 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 CD247P20963 164 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 GPD2P43304 727 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 ERVK-8P63133 956 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 PCDH1Q08174 1060 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 FAM174BQ3ZCQ3 159 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 ZBED5Q49AG3 693 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 RNASE12Q5GAN4 147 aaKnown RBP10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 OGFOD2Q6N063 350 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 LRRC69Q6ZNQ3 347 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 C9orf43Q8TAL5 461 aaPredicted RBP10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 ACBD6Q9BR61 282 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 GTPBP2Q9BX10 602 aaKnown RBP10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 OXCT2Q9BYC2 517 aaPredicted RBP10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 NMUR1Q9HB89 426 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 KCNIP3Q9Y2W7 256 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 TMEM131LA2VDJ0 1609 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 OR6C70A6NIJ9 312 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 OR2AT4A6NND4 320 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 ARL3P36405 182 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 RPL35P42766 123 aaKnown RBP10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 EIF5AP63241 154 aaKnown RBP10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 ZNF234Q14588 700 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 SLC9B1Q4ZJI4 515 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 SNAP47Q5SQN1 464 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 C1orf94Q6P1W5 598 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 ATCAYQ86WG3 371 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 CPNE9Q8IYJ1 553 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 SNX33Q8WV41 574 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 ZNF570Q96NI8 536 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 ZNF317Q96PQ6 595 aaPredicted RBP10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 EBF2Q9HAK2 575 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 FBXW11Q9UKB1 542 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 FARSAQ9Y285 508 aaKnown RBP10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 EFCAB9A8MZ26 197 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 KLF11O14901 512 aa10.09□□□□□ -0.79
LIMCH1-203ENST00000396595 PGLSO95336 258 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms