RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 TRIM43BA6NCK2 446 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 C16orf96A6NNT2 1141 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 ANKRD66B4E2M5 251 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 ACSL4O60488 711 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 ESR1P03372 595 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 SLC2A4P14672 509 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 AGXTP21549 392 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 TPP2P29144 1249 aaPredicted RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 PTGER3P43115 390 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 GABARAPL2P60520 117 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 SPCS2Q15005 226 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 SLC16A12Q6ZSM3 486 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 ABI1Q8IZP0 508 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 TRIM43Q96BQ3 446 aaPredicted RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 SEPT5Q99719 369 aaPredicted RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 THUMPD3Q9BV44 507 aaKnown RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 FUNDC2Q9BWH2 189 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 RAD21L1Q9H4I0 556 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 ELAC1Q9H777 363 aaKnown RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 IPPKQ9H8X2 491 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 ACTR8Q9H981 624 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 DHRS7Q9Y394 339 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 TNPO3Q9Y5L0 923 aaKnown RBP18■□□□□ 0.47
PCDHA1-202ENST00000394633 COMMD10Q9Y6G5 202 aa18■□□□□ 0.47
PCDHA1-202ENST00000394633 CFAP99D6REC4 459 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 BCAP31P51572 246 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 EPS8Q12929 822 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 PPP1R8Q12972 351 aaKnown RBP17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 GRAMD4Q6IC98 578 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 TMEM179BQ7Z7N9 219 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 SVOPLQ8N434 492 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 NAT16Q8N8M0 369 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 MUL1Q969V5 352 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 PDLIM5Q96HC4 596 aaKnown RBP17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 SLC25A37Q9NYZ2 338 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 ERGIC3Q9Y282 383 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 PRKD3O94806 890 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 VNN2O95498 520 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 OTCP00480 354 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 ZDHHC11BP0C7U3 371 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 NR4A1P22736 598 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 HTR1BP28222 390 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 HSPA7P48741 367 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 CDH4P55283 916 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 KCNC4Q03721 635 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 FAM174BQ3ZCQ3 159 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 SPESP1Q6UW49 350 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 MILR1Q7Z6M3 343 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 IGFN1Q86VF2 1251 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 TMEM173Q86WV6 379 aaPredicted RBP17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 CCDC97Q96F63 343 aaPredicted RBP17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 PPP3R2Q96LZ3 170 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 RBM4BQ9BQ04 359 aaKnown RBP17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 TBCDQ9BTW9 1192 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 RBM4Q9BWF3 364 aaKnown RBP17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 DGCR6LQ9BY27 220 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 ELOVL2Q9NXB9 296 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 LRFN2Q9ULH4 789 aa17.99■□□□□ 0.47
PCDHA1-202ENST00000394633 ELOVL7A1L3X0 281 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 H7C0S8 307 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 CXCR6O00574 342 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 TAPBPO15533 448 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 FFAR2O15552 330 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 BCAS1O75363 584 aaPredicted RBP17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 PIK3CGP48736 1102 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 SGSHP51688 502 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 SFSWAPQ12872 951 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 SPIDRQ14159 915 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 MAPKAPK3Q16644 382 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 DNAJC14Q6Y2X3 702 aaPredicted RBP17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 ADAMTSL2Q86TH1 951 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 ABHD11Q8NFV4 315 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 FAM162AQ96A26 154 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 RHBDF1Q96CC6 855 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 ZBTB18Q99592 522 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 NSUN3Q9H649 340 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 WARS2Q9UGM6 360 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 B3GNT3Q9Y2A9 372 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 COL4A6Q14031 1691 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 MTMR11A4FU01 709 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 NT5C1B-RDH14C9J2C7 533 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 GNGT2O14610 69 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 SYN3O14994 580 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 AXIN1O15169 862 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 S100BP04271 92 aaPredicted RBP17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 CSF2RAP15509 400 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 AKT1P31749 480 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 KPNA1P52294 538 aaPredicted RBP17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 ISL1P61371 349 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 MRPL58Q14197 206 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 SPANXN4Q5MJ08 99 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 LDLRAP1Q5SW96 308 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 CRTC3Q6UUV7 619 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 FKBP9P1Q75LS8 142 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 GIPC2Q8TF65 315 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 CCDC138Q96M89 665 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 ADGRE3Q9BY15 652 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 FARSBQ9NSD9 589 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 PAK1IP1Q9NWT1 392 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms