RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 ENO2P09104 434 aaPredicted RBP21.1■□□□□ 0.97
TRIM54-202ENST00000380075 JAK1P23458 1154 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 CDKL1Q00532 357 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 PTSQ03393 145 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 PHKG1Q16816 387 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 TCAIMQ8N3R3 496 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 FGF13Q92913 245 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 OSBPL11Q9BXB4 747 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 YIPF3Q9GZM5 350 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 ZDHHC6Q9H6R6 413 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 KATNA1O75449 491 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 ANXA5P08758 320 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 AP5B1Q2VPB7 878 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 PUS10Q3MIT2 529 aaKnown RBP21.1■□□□□ 0.97
TRIM54-202ENST00000380075 PAGE3Q5JUK9 113 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 CYP20A1Q6UW02 462 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 DPY19L3Q6ZPD9 716 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 GALNT4Q8N4A0 578 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 PACRGLQ8N7B6 248 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 PPWD1Q96BP3 646 aaKnown RBP21.1■□□□□ 0.97
TRIM54-202ENST00000380075 ZSWIM3Q96MP5 696 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 KCTD14Q9BQ13 255 aaPredicted RBP21.1■□□□□ 0.97
TRIM54-202ENST00000380075 SLC29A3Q9BZD2 475 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 SMG9Q9H0W8 520 aaKnown RBP21.1■□□□□ 0.97
TRIM54-202ENST00000380075 TBC1D14Q9P2M4 693 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 CCL27Q9Y4X3 112 aa21.1■□□□□ 0.97
TRIM54-202ENST00000380075 A8MX80 341 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 ARPC2O15144 300 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 TNFAIP8O95379 198 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 UMPSP11172 480 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 FCGR1AP12314 374 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 BMP1P13497 986 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 EPB42P16452 691 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 ZNF30P17039 623 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 LHCGRP22888 699 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 IL12AP29459 219 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 GSK3BP49841 420 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 ABRAXAS2Q15018 415 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 TIGD2Q4W5G0 525 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 BRAT1Q6PJG6 821 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 TMEM25Q86YD3 366 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 HID1Q8IV36 788 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 NPAS3Q8IXF0 933 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 MYADMQ96S97 322 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 COQ10BQ9H8M1 238 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 BRD9Q9H8M2 597 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 C8orf4Q9NR00 106 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 PKD2L2Q9NZM6 624 aa21.09■□□□□ 0.97
TRIM54-202ENST00000380075 EIF3LQ9Y262 564 aaKnown RBP21.09■□□□□ 0.97
TRIM54-202ENST00000380075 C8GP07360 202 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 NFKBIAP25963 317 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 HTR1EP28566 365 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 SPINT3P49223 89 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 LIPEQ05469 1076 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 FXNQ16595 210 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 AAK1Q2M2I8 961 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 ATP13A5Q4VNC0 1218 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 LIN52Q52LA3 116 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 MTX3Q5HYI7 312 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 TBCELQ5QJ74 424 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 HMBOX1Q6NT76 420 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 TRIM46Q7Z4K8 759 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 PHC3Q8NDX5 983 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 DNAJB14Q8TBM8 379 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 IRF7Q92985 503 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 BBS2Q9BXC9 721 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 SEMA6AQ9H2E6 1030 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 ASIC5Q9NY37 505 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 NDUFA13Q9P0J0 144 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 CCL26Q9Y258 94 aa21.08■□□□□ 0.97
TRIM54-202ENST00000380075 NEDD8-MDP1E9PL57 170 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 AKAP10O43572 662 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 STK16O75716 305 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 UGT2B4P06133 528 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 C1SP09871 688 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 CYP2A6P11509 494 aaPredicted RBP21.08■□□□□ 0.96
TRIM54-202ENST00000380075 PCSK2P16519 638 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 RECQLP46063 649 aaPredicted RBP21.08■□□□□ 0.96
TRIM54-202ENST00000380075 GBX1Q14549 363 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 GDPD4Q6W3E5 623 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 PROSER1Q86XN7 944 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 SPPL2CQ8IUH8 684 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 ADGRG2Q8IZP9 1017 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 TSC22D3Q99576 134 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 ZBTB18Q99592 522 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 PHF7Q9BWX1 381 aaPredicted RBP21.08■□□□□ 0.96
TRIM54-202ENST00000380075 SLC2A11Q9BYW1 496 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 ZNF696Q9H7X3 374 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 TDP1Q9NUW8 608 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 SMOXQ9NWM0 555 aa21.08■□□□□ 0.96
TRIM54-202ENST00000380075 ANKRD28O15084 1053 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 KPNA5O15131 536 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 BNIP3LO60238 219 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 MPC1LP0DKB6 136 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 G6PDP11413 515 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 GGT5P36269 586 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 FOXB2Q5VYV0 432 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 ASTLQ6HA08 431 aaPredicted RBP21.07■□□□□ 0.96
TRIM54-202ENST00000380075 NANOGP8Q6NSW7 305 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 PPP4R4Q6NUP7 873 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms