RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 RORBQ92753 470 aa16.31■□□□□ 0.2
PCDHA1-201ENST00000378133 CINPQ9BW66 212 aaPredicted RBP16.31■□□□□ 0.2
PCDHA1-201ENST00000378133 ALOXE3Q9BYJ1 711 aa16.31■□□□□ 0.2
PCDHA1-201ENST00000378133 NDEL1Q9GZM8 345 aa16.31■□□□□ 0.2
PCDHA1-201ENST00000378133 IFT52Q9Y366 437 aa16.31■□□□□ 0.2
PCDHA1-201ENST00000378133 PCDHGC4Q9Y5F7 938 aa16.31■□□□□ 0.2
PCDHA1-201ENST00000378133 NOX1Q9Y5S8 564 aa16.31■□□□□ 0.2
PCDHA1-201ENST00000378133 PMF1-BGLAPU3KQ54 211 aa16.31■□□□□ 0.2
PCDHA1-201ENST00000378133 C2orf81A6NN90 581 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 E2F3O00716 465 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 KLK8O60259 260 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 VPS26AO75436 327 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 PRLP01236 227 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 PKMP14618 531 aaKnown RBP16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 FSHRP23945 695 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 SLC6A4P31645 630 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 PLIN5Q00G26 463 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 DMPKQ09013 629 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 TAF1AQ15573 450 aaPredicted RBP16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 KCNA10Q16322 511 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 TXNDC11Q6PKC3 985 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 ISG20Q96AZ6 181 aaKnown RBP16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 LINGO1Q96FE5 620 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 BCL7BQ9BQE9 202 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 C1QTNF3Q9BXJ4 246 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 FKBPLQ9UIM3 349 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 TRMT6Q9UJA5 497 aaKnown RBP16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 TSR3Q9UJK0 312 aaKnown RBP16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 NAALAD2Q9Y3Q0 740 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 GBF1Q92538 1859 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 FAM234BA2RU67 622 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 PSMD11O00231 422 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 XPNPEP2O43895 674 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 TLR5O60602 858 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 NPPAP01160 153 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 CYBAP13498 195 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 ERVPABLB-1P60509 514 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 PPP2R2BQ00005 443 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 SREBF2Q12772 1141 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 LAPTM5Q13571 262 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 SELPLGQ14242 412 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 AAK1Q2M2I8 961 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 ATAD3BQ5T9A4 648 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 FAM171A1Q5VUB5 890 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 ALG1LQ6GMV1 187 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 LPCAT1Q8NF37 534 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 PSMA8Q8TAA3 256 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 FBXO30Q8TB52 745 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 PSKH2Q96QS6 385 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 RBM4BQ9BQ04 359 aaKnown RBP16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 RBM4Q9BWF3 364 aaKnown RBP16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 UGT2B28Q9BY64 529 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 DNAJB9Q9UBS3 223 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 ITM2BQ9Y287 266 aa16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 ZFP37Q9Y6Q3 630 aaPredicted RBP16.3■□□□□ 0.2
PCDHA1-201ENST00000378133 IQCF5A8MTL0 148 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 INSIG1O15503 277 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 MC4RP32245 332 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 MAGEA11P43364 429 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 IL2P60568 153 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 RPS24P62847 133 aaKnown RBP16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 PPP1R8Q12972 351 aaKnown RBP16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 PLA2G4EQ3MJ16 856 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 ATP6AP1LQ52LC2 224 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 CTSL3PQ5NE16 218 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 PAGE2Q7Z2X7 111 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 EFL1Q7Z2Z2 1120 aaKnown RBP16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 FAM86B1Q8N7N1 296 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 TTC16Q8NEE8 873 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 PJA1Q8NG27 643 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 GIPC2Q8TF65 315 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 FIG4Q92562 907 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 HTRA1Q92743 480 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 DACH2Q96NX9 599 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 THG1LQ9NWX6 298 aaKnown RBP16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 UBA2Q9UBT2 640 aaPredicted RBP16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 MOXD2PA6NHM9 499 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 HS6ST1O60243 411 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 SEC24AO95486 1093 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 PTPN2P17706 415 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 TM4SF4P48230 202 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 MRPL19P49406 292 aaKnown RBP16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 RING1Q06587 406 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 SLC13A2Q13183 592 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 PRKG2Q13237 762 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 C18orf21Q32NC0 220 aaPredicted RBP16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 ZRANB3Q5FWF4 1079 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 SPESP1Q6UW49 350 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 ENPP6Q6UWR7 440 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 NEK10Q6ZWH5 1172 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 AKAP14Q86UN6 197 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 EFHBQ8N7U6 833 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 CD200R1Q8TD46 325 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 CAPSLQ8WWF8 208 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 TRIB2Q92519 343 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 ASPSCR1Q9BZE9 553 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 CARS2Q9HA77 564 aaKnown RBP16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 ZIM2Q9NZV7 527 aa16.29■□□□□ 0.2
PCDHA1-201ENST00000378133 A0A1W2PQ67 120 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 GPR39O43194 453 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms