RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 GPR33Q49SQ1 333 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 MFSD4BQ5TF39 518 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 MACC1Q6ZN28 852 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 TPRG1Q6ZUI0 275 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 NANOGNBQ7Z5D8 188 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 DHFR2Q86XF0 187 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 NXPE1Q8N323 547 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 TMEM199Q8N511 208 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 ZBTB2Q8N680 514 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 OR4F6Q8NGB9 312 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 HM13Q8TCT9 377 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 C17orf50Q8WW18 174 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 VPS33AQ96AX1 596 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 LRRC58Q96CX6 371 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 TCEAL4Q96EI5 215 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 ANKRD60Q9BZ19 345 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 GID8Q9NWU2 228 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 PTBP2Q9UKA9 531 aaKnown RBP13.71□□□□□ -0.21
MSH5-202ENST00000375740 ZNF106Q9H2Y7 1883 aaKnown RBP13.71□□□□□ -0.21
MSH5-202ENST00000375740 A0A1W2PP18 115 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 TCRBV3S1A0A5B6 114 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 SYNCRIPO60506 623 aaKnown RBP13.71□□□□□ -0.22
MSH5-202ENST00000375740 TIPRLO75663 272 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 SLC22A3O75751 556 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 HTR6P50406 440 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 MLLT10P55197 1068 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 KCNK10P57789 538 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 ERVFC1P60507 584 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 ESRRGP62508 458 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 ERVK-8P63133 956 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 NR1D2Q14995 579 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 LRRC66Q68CR7 880 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 PRMT9Q6P2P2 845 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 C22orf39Q6P5X5 142 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 IL27RAQ6UWB1 636 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 RFLNAQ6ZTI6 216 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 PDPRQ8NCN5 879 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 ASIC4Q96FT7 647 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 LYSMD1Q96S90 227 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 BEGAINQ9BUH8 593 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 HTATIP2Q9BUP3 242 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 APOL5Q9BWW9 433 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 ABCG8Q9H221 673 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 IPPKQ9H8X2 491 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 CMTM6Q9NX76 183 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 SLCO3A1Q9UIG8 710 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 HS3ST2Q9Y278 367 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 OARD1Q9Y530 152 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 ST14Q9Y5Y6 855 aa13.71□□□□□ -0.22
MSH5-202ENST00000375740 DLGAP1O14490 977 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 GLUD1P00367 558 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 HSPA8P11142 646 aaKnown RBP13.7□□□□□ -0.22
MSH5-202ENST00000375740 SLC6A2P23975 617 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 RCVRNP35243 200 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 MRPL19P49406 292 aaKnown RBP13.7□□□□□ -0.22
MSH5-202ENST00000375740 PTSQ03393 145 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 KCNC4Q03721 635 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 RAB39AQ14964 217 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 PHKG1Q16816 387 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 ZBTB49Q6ZSB9 765 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 BTLAQ7Z6A9 289 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 ZC3H7AQ8IWR0 971 aaKnown RBP13.7□□□□□ -0.22
MSH5-202ENST00000375740 ADGRG2Q8IZP9 1017 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 SFRP1Q8N474 314 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 FNDC5Q8NAU1 212 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 TFAP2CQ92754 450 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 ISG20Q96AZ6 181 aaKnown RBP13.7□□□□□ -0.22
MSH5-202ENST00000375740 ECHDC3Q96DC8 303 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 HBEGFQ99075 208 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 TCF25Q9BQ70 676 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 BRINP2Q9C0B6 783 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 ZDHHC6Q9H6R6 413 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 ABCD2Q9UBJ2 740 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 ZMYM5Q9UJ78 669 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 GPC6Q9Y625 555 aaPredicted RBP13.7□□□□□ -0.22
MSH5-202ENST00000375740 ASPDHA6ND91 283 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 SAC3D1A6NKF1 404 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 HIDE1A8MVS5 230 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 KIAA0355O15063 1070 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 GRM6O15303 877 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 BAIAP3O94812 1187 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 GRIA3P42263 894 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 PRKCQQ04759 706 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 ATP6AP1LQ52LC2 224 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 CARD16Q5EG05 197 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 COQ5Q5HYK3 327 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 NIPAL1Q6NVV3 410 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 TTC33Q6PID6 262 aaPredicted RBP13.7□□□□□ -0.22
MSH5-202ENST00000375740 DPY19L3Q6ZPD9 716 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 TSPEARQ8WU66 669 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 PPWD1Q96BP3 646 aaKnown RBP13.7□□□□□ -0.22
MSH5-202ENST00000375740 DUS3LQ96G46 650 aaKnown RBP13.7□□□□□ -0.22
MSH5-202ENST00000375740 EGFL8Q99944 293 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 TRIM8Q9BZR9 551 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 SMOXQ9NWM0 555 aa13.7□□□□□ -0.22
MSH5-202ENST00000375740 A0A087WXM4 84 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 AGAP14A8MT82 685 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 NEDD8-MDP1E9PL57 170 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 LHCGRP22888 699 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 IL12AP29459 219 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms