RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SETMARQ53H47 684 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-203ENST00000374877 LETMD1Q6P1Q0 360 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 BEND5Q7L4P6 421 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 DEFB128Q7Z7B8 93 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 TMEM179BQ7Z7N9 219 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 P2RY8Q86VZ1 359 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 GPSM1Q86YR5 675 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 SVOPLQ8N434 492 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 SIDT2Q8NBJ9 832 aaKnown RBP10.89□□□□□ -0.67
CCDC40-203ENST00000374877 MINDY2Q8NBR6 621 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 GPR150Q8NGU9 434 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 VMP1Q96GC9 406 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 PSD2Q9BQI7 771 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 ACBD6Q9BR61 282 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 ALOXE3Q9BYJ1 711 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 ZYG11BQ9C0D3 744 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 PNMA8BQ9ULN7 279 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-203ENST00000374877 MED16Q9Y2X0 877 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 STX16O14662 325 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 PFDN6O15212 129 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 NIPSNAP2O75323 286 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 SEC24AO95486 1093 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 FGF1P05230 155 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 CNPP09543 421 aaKnown RBP10.89□□□□□ -0.67
CCDC40-203ENST00000374877 VAC14Q08AM6 782 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 RAPSNQ13702 412 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 SIM2Q14190 667 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-203ENST00000374877 AP5B1Q2VPB7 878 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 SDHAF4Q5VUM1 108 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 MFSD4AQ8N468 514 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 PIK3C3Q8NEB9 887 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 PJA1Q8NG27 643 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 OR10T2Q8NGX3 314 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 BRSK1Q8TDC3 778 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 BTN2A3PQ96KV6 586 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 DACH2Q96NX9 599 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 ACTL8Q9H568 366 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 KLQ9UEF7 1012 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 TDRD15B5MCY1 1934 aaKnown RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 SYN3O14994 580 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 B4GALT3O60512 393 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 MITFO75030 526 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF24P17028 368 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 HLA-DPA1P20036 260 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 SERPINB1P30740 379 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 GGT5P36269 586 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 DCTP40126 519 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 MRPL19P49406 292 aaKnown RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 CDKN1CP49918 316 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ACVR1Q04771 509 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 CDK5R2Q13319 367 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 PTGR1Q14914 329 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 LAPTM4AQ15012 233 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF691Q5VV52 312 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 TXNDC11Q6PKC3 985 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 DET1Q7L5Y6 550 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 PAGE2Q7Z2X7 111 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ADHFE1Q8IWW8 467 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 THEM5Q8N1Q8 247 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ARL10Q8N8L6 244 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 HTRA1Q92743 480 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 TRIM43Q96BQ3 446 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 LINGO1Q96FE5 620 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 SERPINB11Q96P15 392 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 POLR1EQ9GZS1 481 aaKnown RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 IKZF5Q9H5V7 419 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 TRMT6Q9UJA5 497 aaKnown RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 POU2F3Q9UKI9 436 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 CARNS1A5YM72 827 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 CXCR6O00574 342 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 FADS2O95864 444 aaKnown RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 SLC2A4P14672 509 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 RHOQP17081 205 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 HK3P52790 923 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 RPL38P63173 70 aaKnown RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 CYP4F3Q08477 520 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ILF2Q12905 390 aaKnown RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 SLC13A2Q13183 592 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 TRIP4Q15650 581 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 BCL2A1Q16548 175 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 RFTN2Q52LD8 501 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 FAM171BQ6P995 826 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 GCNT7Q6ZNI0 430 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 OR4K2Q8NGD2 314 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 OR6Q1Q8NGQ2 317 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 EEF1AKMT1Q8WVE0 214 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 SLC13A3Q8WWT9 602 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ASPSCR1Q9BZE9 553 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 RIBC2Q9H4K1 309 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ABCB10Q9NRK6 738 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ZMYM5Q9UJ78 669 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 INTS6Q9UL03 887 aaKnown RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ELOVL7A1L3X0 281 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 E2F3O00716 465 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 PRMT5O14744 637 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 MUSKO15146 869 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 RAMP2O60895 175 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 DNAJB5O75953 348 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 HMBSP08397 361 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 PFKLP17858 780 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms