RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TIMM22Q9Y584 194 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 MYH7BA7E2Y1 1941 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 STX16-NPEPL1H3BU86 382 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 STX16O14662 325 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 OAS1P00973 400 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 DLDP09622 509 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 KCNJ2P63252 427 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 FOXM1Q08050 763 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SLC39A5Q6ZMH5 540 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 KBTBD6Q86V97 674 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 LMO3Q8TAP4 145 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 PNPT1Q8TCS8 783 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CRYGNQ8WXF5 182 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SMPDL3AQ92484 453 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ZBED3Q96IU2 234 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ART5Q96L15 291 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 HERC2P3Q9BVR0 1158 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 PRRG4Q9BZD6 226 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 WDR55Q9H6Y2 383 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 WDR6Q9NNW5 1121 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CRTAC1Q9NQ79 661 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 DNAJB4Q9UDY4 337 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 AJAP1Q9UKB5 411 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 AKAP11Q9UKA4 1901 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 TMEM150CB9EJG8 249 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 MAGEB3O15480 346 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 OR4F21O95013 312 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 HRH2P25021 359 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 TM4SF4P48230 202 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 CCNHP51946 323 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-202ENST00000360093 DNAJB13P59910 316 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 NFKB2Q00653 900 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 LIPEQ05469 1076 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 ZNF155Q12901 538 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-202ENST00000360093 MYO9BQ13459 2157 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 TXNDC8Q6A555 127 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 C15orf39Q6ZRI6 1047 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 GK5Q6ZS86 529 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 CYP2U1Q7Z449 544 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 PIGWQ7Z7B1 504 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 AGAP11Q8TF27 550 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 TMEM174Q8WUU8 243 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 SLC13A3Q8WWT9 602 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 TOP1MTQ969P6 601 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 CENPNQ96H22 339 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-202ENST00000360093 RANBP9Q96S59 729 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 CDADC1Q9BWV3 514 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 EGFL7Q9UHF1 273 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 PHF11Q9UIL8 331 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 COL18A1P39060 1754 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 hCG_2014768A0A024R1R8 64 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 KCNJ13O60928 360 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 HOXB2P14652 356 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 S100GP29377 79 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 RPS21P63220 83 aaKnown RBP4.77□□□□□ -1.65
SCN3A-202ENST00000360093 TEAD2Q15562 447 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 CCDC92Q53HC0 331 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-202ENST00000360093 PRAMEF14Q5SWL7 426 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 PRAMEF13Q5VWM6 474 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 GRASPQ7Z6J2 395 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-202ENST00000360093 SLC9B2Q86UD5 537 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 ZDHHC14Q8IZN3 488 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 UMODL1-AS1Q8N2C9 162 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 TRPV3Q8NET8 790 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 XAGE5Q8WWM1 108 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 FAM83CQ9BQN1 747 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 LRRC3Q9BY71 257 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 SPATA7Q9P0W8 599 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 PTGFRNQ9P2B2 879 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 EIF2B4Q9UI10 523 aaKnown RBP4.77□□□□□ -1.65
SCN3A-202ENST00000360093 PCDHB11Q9Y5F2 797 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 TNFRSF11BO00300 401 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 MAN2B1O00754 1011 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 PPEF2O14830 753 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 PIP5K1BO14986 540 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 CYBAP13498 195 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 IL12BP29460 328 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 GSSP48637 474 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 DGKEP52429 567 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 CYP4F2P78329 520 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 FOLH1Q04609 750 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 WDR45BQ5MNZ6 344 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 FRG2Q64ET8 278 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 CLEC6AQ6EIG7 209 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 ENPP7Q6UWV6 458 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 ZC3HC1Q86WB0 502 aaKnown RBP4.77□□□□□ -1.65
SCN3A-202ENST00000360093 CILP2Q8IUL8 1156 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 MMAAQ8IVH4 418 aaKnown RBP4.77□□□□□ -1.65
SCN3A-202ENST00000360093 NRSN1Q8IZ57 195 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 SMG8Q8ND04 991 aaKnown RBP4.77□□□□□ -1.65
SCN3A-202ENST00000360093 RBM15BQ8NDT2 890 aaKnown RBP4.77□□□□□ -1.65
SCN3A-202ENST00000360093 TRPV1Q8NER1 839 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 PIGXQ8TBF5 258 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 PPM1MQ96MI6 270 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 PSKH2Q96QS6 385 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 FRG2BQ96QU4 278 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 OR2AG1Q9H205 316 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 GKN1Q9NS71 199 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 CKLFQ9UBR5 152 aa4.77□□□□□ -1.65
SCN3A-202ENST00000360093 COQ6Q9Y2Z9 468 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms