RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 VPS26AO75436 327 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 PEX11BO96011 259 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 SPNP16150 400 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 OGNP20774 298 aaKnown RBP7.54□□□□□ -1.2
CD46-204ENST00000357714 HTR7P34969 479 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 BMPR1AP36894 532 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 CASP3P42574 277 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 PIK3CGP48736 1102 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 FCGRTP55899 365 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 DEFA1P59665 94 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 DEFA3P59666 94 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 MVKQ03426 396 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 XKR4Q5GH76 650 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 SPANXN4Q5MJ08 99 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 TPRG1LQ5T0D9 272 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 UBXN11Q5T124 520 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 MANEALQ5VSG8 457 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 CYP4Z1Q86W10 505 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 AMER2Q8N7J2 671 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 SIDT2Q8NBJ9 832 aaKnown RBP7.54□□□□□ -1.2
CD46-204ENST00000357714 OR6J1Q8NGC5 347 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 LILRB4Q8NHJ6 448 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 LINGO1Q96FE5 620 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 CDKN2AIPNLQ96HQ2 116 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 YME1L1Q96TA2 773 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 MYOCQ99972 504 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 RNF38Q9H0F5 515 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 MROH8Q9H579 483 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 HEBP1Q9NRV9 189 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 ABCC13Q9NSE7 274 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 KIF17Q9P2E2 1029 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 EIF3LQ9Y262 564 aaKnown RBP7.54□□□□□ -1.2
CD46-204ENST00000357714 PKP3Q9Y446 797 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 PDZK1P1A8MUH7 402 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 E5RI56 91 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 TAF4O00268 1085 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 IFRD1O00458 451 aaPredicted RBP7.54□□□□□ -1.2
CD46-204ENST00000357714 TSPAN3O60637 253 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 NIPSNAP2O75323 286 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 MED26O95402 600 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 FGF1P05230 155 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 TUFMP49411 452 aaKnown RBP7.54□□□□□ -1.2
CD46-204ENST00000357714 MLLT6P55198 1093 aaPredicted RBP7.54□□□□□ -1.2
CD46-204ENST00000357714 IL2P60568 153 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 ZNF235Q14590 738 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 DALRD3Q5D0E6 543 aaKnown RBP7.54□□□□□ -1.2
CD46-204ENST00000357714 SGO1Q5FBB7 561 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 ZC3H12BQ5HYM0 836 aaKnown RBP7.54□□□□□ -1.2
CD46-204ENST00000357714 UBE2UQ5VVX9 321 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 CES5AQ6NT32 575 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 PRSS48Q7RTY5 328 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 P3H2Q8IVL5 708 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 ZDHHC21Q8IVQ6 265 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 SLC22A15Q8IZD6 547 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 TTC29Q8NA56 475 aaPredicted RBP7.54□□□□□ -1.2
CD46-204ENST00000357714 ATG16L2Q8NAA4 619 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 GPR150Q8NGU9 434 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 BRSK1Q8TDC3 778 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 NETO1Q8TDF5 533 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 GTF2H4Q92759 462 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 RMDN1Q96DB5 314 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 SLC10A4Q96EP9 437 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 ZNF382Q96SR6 550 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 BTBD2Q9BX70 525 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 ANKHQ9HCJ1 492 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 DCAF13Q9NV06 445 aaKnown RBP7.54□□□□□ -1.2
CD46-204ENST00000357714 CPA4Q9UI42 421 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 OSGIN1Q9UJX0 560 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 CAB39Q9Y376 341 aaPredicted RBP7.54□□□□□ -1.2
CD46-204ENST00000357714 ADM5C9JUS6 153 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 E2F3O00716 465 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 FFAR3O14843 346 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 GPR42O15529 346 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 DIRAS1O95057 198 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 PTTG1O95997 202 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 MMP3P08254 477 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 ITGAMP11215 1152 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 HLA-DPA1P20036 260 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 SCNN1GP51170 649 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 TUBA1BP68363 451 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 PCBP1Q15365 356 aaKnown RBP eCLIP7.53□□□□□ -1.21e-6■■■□□ 18
CD46-204ENST00000357714 ALFQ53S48 1182 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 LAIR1Q6GTX8 287 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 MSANTD2Q6P1R3 559 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 TUBA1AQ71U36 451 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 SPATC1Q76KD6 591 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 MILR1Q7Z6M3 343 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 GATAD2AQ86YP4 633 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 METTL4Q8N3J2 472 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 OR4F6Q8NGB9 312 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 CLHC1Q8NHS4 586 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 ARRDC2Q8TBH0 407 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 EEF1AKMT1Q8WVE0 214 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 OR52E6Q96RD3 313 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 BARD1Q99728 777 aaKnown RBP7.53□□□□□ -1.2
CD46-204ENST00000357714 ITPAQ9BY32 194 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 TMEM45AQ9NWC5 275 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 OSER1Q9NX31 292 aa7.53□□□□□ -1.2
CD46-204ENST00000357714 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.53□□□□□ -1.2
CD46-204ENST00000357714 OPTCQ9UBM4 332 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms