RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 EML4Q9HC35 981 aaKnown RBP17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 PRMT8Q9NR22 394 aaPredicted RBP17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 GPR27Q9NS67 375 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 KLC4Q9NSK0 619 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 PNPOQ9NVS9 261 aa17.72■□□□□ 0.43
SMARCD3-202ENST00000356800 TMEM221A6NGB7 291 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 M0R296 226 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 TOR1BO14657 336 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 DCTN3O75935 186 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 MPSTP25325 297 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 CD27P26842 260 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 HTR1BP28222 390 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 RPL14P50914 215 aaKnown RBP17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 THOP1P52888 689 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 AQP5P55064 265 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 CDH13P55290 713 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 HNRNPH2P55795 449 aaKnown RBP17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 CDKL1Q00532 357 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 ZXDCQ2QGD7 858 aaPredicted RBP17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 CCSMST1Q4G0I0 132 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 USP39Q53GS9 565 aaKnown RBP17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 CCT6BQ92526 530 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 TSACCQ96A04 125 aaPredicted RBP17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 SPACA7Q96KW9 195 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 TMEM79Q9BSE2 394 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 SHCBP1LQ9BZQ2 653 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 ZDHHC5Q9C0B5 715 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 CAAP1Q9H8G2 361 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 EIF2B4Q9UI10 523 aaKnown RBP17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 PCTPQ9UKL6 214 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 KCNK6Q9Y257 313 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 GPSM3Q9Y4H4 160 aa17.71■□□□□ 0.43
SMARCD3-202ENST00000356800 KLHL33A6NCF5 533 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 UBFD1O14562 309 aaKnown RBP17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 ZNF195O14628 629 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 TNFRSF10CO14798 259 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 S100BP04271 92 aaPredicted RBP17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 TSPAN8P19075 237 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 CYP2A7P20853 494 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 BDKRB1P46663 353 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 ALG11Q2TAA5 492 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 SULT1C3Q6IMI6 304 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 PDZD3Q86UT5 571 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 KIRREL3Q8IZU9 778 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 ZNF483Q8TF39 744 aaPredicted RBP17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 OR2M4Q96R27 311 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 EGFL8Q99944 293 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 TNFRSF12AQ9NP84 129 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 ABCF3Q9NUQ8 709 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 ARL15Q9NXU5 204 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 PSMD13Q9UNM6 376 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 THADAQ6YHU6 1953 aa17.71■□□□□ 0.42
SMARCD3-202ENST00000356800 FANCMQ8IYD8 2048 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 SLCO1B7G3V0H7 640 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 MATN2O00339 956 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 E2F3O00716 465 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 PPP6CO00743 305 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 MAOBP27338 520 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 FNTBP49356 437 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 SRP54P61011 504 aaKnown RBP17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 PCBP2Q15366 365 aaKnown RBP eCLIP17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 CDKL4Q5MAI5 379 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 ANKS6Q68DC2 871 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 SLC36A4Q6YBV0 504 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 MAML2Q8IZL2 1156 aaPredicted RBP17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 FITM2Q8N6M3 262 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 GBP7Q8N8V2 638 aaPredicted RBP17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 MCOLN3Q8TDD5 553 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 UBTD2Q8WUN7 234 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 HSPA12BQ96MM6 686 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 LRRC37BQ96QE4 947 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 TRIM54Q9BYV2 358 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 WWP1Q9H0M0 922 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 ZBTB26Q9HCK0 441 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 DNAJC28Q9NX36 388 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 KLQ9UEF7 1012 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 ZDHHC2Q9UIJ5 367 aa17.7■□□□□ 0.42
SMARCD3-202ENST00000356800 ZDBF2Q9HCK1 2354 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 CCDC163A0A0D9SF12 145 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 C1orf105O95561 183 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 CATP04040 527 aaKnown RBP17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 ANXA5P08758 320 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 THEGLP0DJG4 465 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 RPL10P27635 214 aaKnown RBP17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 MAPK9P45984 424 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 HSPA7P48741 367 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 AP1S2P56377 157 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 FAM219BQ5XKK7 198 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 RD3Q7Z3Z2 195 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 MAVSQ7Z434 540 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 TMEFF1Q8IYR6 380 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 AGR3Q8TD06 166 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 STON2Q8WXE9 905 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 FOPNLQ96NB1 174 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 OSGEPL1Q9H4B0 414 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 AASDHPPTQ9NRN7 309 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 VTI1BQ9UEU0 232 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 ACSL5Q9ULC5 683 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms