RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 TALDO1P37837 337 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 NTHL1P78549 312 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 IGDCC3Q8IVU1 814 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 CENPIQ92674 756 aaPredicted RBP14.62□□□□□ -0.07
COL17A1-201ENST00000353479 GAL3ST4Q96RP7 486 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 SH3GLB1Q9Y371 365 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 TGFB1P01137 390 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 NDUFS1P28331 727 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 SERPINB1P30740 379 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 AVPR1BP47901 424 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 SRSF11Q05519 484 aaKnown RBP14.62□□□□□ -0.07
COL17A1-201ENST00000353479 SLC9B1Q4ZJI4 515 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 ZNF805Q5CZA5 627 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 PGAM4Q8N0Y7 254 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 TEX47Q8TBZ9 253 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 SORCS1Q8WY21 1168 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 ZNF641Q96N77 438 aaPredicted RBP14.62□□□□□ -0.07
COL17A1-201ENST00000353479 GPR22Q99680 433 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 TAC3Q9UHF0 121 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 HNF1BP35680 557 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 MRPS15P82914 257 aaKnown RBP14.62□□□□□ -0.07
COL17A1-201ENST00000353479 HMGCS1Q01581 520 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 KLF1Q13351 362 aaPredicted RBP14.62□□□□□ -0.07
COL17A1-201ENST00000353479 KIAA2013Q8IYS2 634 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 TFGQ92734 400 aaPredicted RBP14.62□□□□□ -0.07
COL17A1-201ENST00000353479 CASD1Q96PB1 797 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 PSKH2Q96QS6 385 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 EBF4Q9BQW3 602 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 GTPBP2Q9BX10 602 aaKnown RBP14.62□□□□□ -0.07
COL17A1-201ENST00000353479 SLC32A1Q9H598 525 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 G3V2T6 193 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 SOCS7O14512 581 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 ITM2AO43736 263 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 SOCS5O75159 536 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 DLGAP3O95886 979 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 CTSOP43234 321 aaPredicted RBP14.62□□□□□ -0.07
COL17A1-201ENST00000353479 DHCR24Q15392 516 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 ERN2Q76MJ5 926 aaKnown RBP14.62□□□□□ -0.07
COL17A1-201ENST00000353479 ZNF248Q8NDW4 579 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 LPGAT1Q92604 370 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 HIC2Q96JB3 615 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 ZFRQ96KR1 1074 aaKnown RBP14.62□□□□□ -0.07
COL17A1-201ENST00000353479 MAGEB17A8MXT2 336 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 PCDH7O60245 1069 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 EPOP01588 193 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 PRKCHP24723 683 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 CST5P28325 142 aaPredicted RBP14.61□□□□□ -0.07
COL17A1-201ENST00000353479 PACS2Q86VP3 889 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 POP5Q969H6 163 aaKnown RBP14.61□□□□□ -0.07
COL17A1-201ENST00000353479 TEFMQ96QE5 360 aaKnown RBP14.61□□□□□ -0.07
COL17A1-201ENST00000353479 DCUN1D5Q9BTE7 237 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 TJP1Q07157 1748 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 HNRNPCP07910 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL17A1-201ENST00000353479 AP1S2P56377 157 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 DPYSQ14117 519 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 TBC1D21Q8IYX1 336 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 IMP4Q96G21 291 aaKnown RBP14.61□□□□□ -0.07
COL17A1-201ENST00000353479 GSDMCQ9BYG8 508 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 ALG2Q9H553 416 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 MRM3Q9HC36 420 aaKnown RBP14.61□□□□□ -0.07
COL17A1-201ENST00000353479 SUCOQ9UBS9 1254 aaKnown RBP14.61□□□□□ -0.07
COL17A1-201ENST00000353479 MAFKO60675 156 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 CBSLP0DN79 551 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 TFPIP10646 304 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 CBSP35520 551 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 ETV3P41162 512 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 SLC9A5Q14940 896 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 LARS2Q15031 903 aaKnown RBP14.61□□□□□ -0.07
COL17A1-201ENST00000353479 AAGABQ6PD74 315 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 APLFQ8IW19 511 aaPredicted RBP14.61□□□□□ -0.07
COL17A1-201ENST00000353479 DEPDC4Q8N2C3 294 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 C6orf62Q9GZU0 229 aaPredicted RBP14.61□□□□□ -0.07
COL17A1-201ENST00000353479 GALPQ9UBC7 116 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 ADAM30Q9UKF2 790 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 OGDHLQ9ULD0 1010 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 TCRBV21S2A2A0A5A6 115 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 TTC34A8MYJ7 566 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 ZBTB42B2RXF5 422 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 KMOO15229 486 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 BCL10O95999 233 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 SIX5Q8N196 739 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 C3orf58Q8NDZ4 430 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 TRPS1Q9UHF7 1281 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 A0A0J9YVX5 310 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 DLX3O60479 287 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 GLDCP23378 1020 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 GDF5P43026 501 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 PREPP48147 710 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 PRR5P85299 388 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 CAND1Q86VP6 1230 aaKnown RBP14.61□□□□□ -0.07
COL17A1-201ENST00000353479 OR8H2Q8N162 312 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 C11orf65Q8NCR3 313 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 OR2T34Q8NGX1 318 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 OR2T3Q8NH03 318 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 OR10A6Q8NH74 314 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 SCAMP4Q969E2 229 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 Q96MT0 163 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 TRAPPC9Q96Q05 1148 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 EFCAB11Q9BUY7 163 aa14.61□□□□□ -0.07
COL17A1-201ENST00000353479 MAFFQ9ULX9 164 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms