RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 EPB42P16452 691 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 MSH3P20585 1137 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 FUT4P22083 530 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 SLC7A9P82251 487 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 FPGSQ05932 587 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 CRTC3Q6UUV7 619 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 CERS6Q6ZMG9 384 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 C12orf40Q86WS4 652 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 TSPAN14Q8NG11 270 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 OR2A12Q8NGT7 310 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 SELENOMQ8WWX9 145 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 SCRN2Q96FV2 425 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 FAM83DQ9H4H8 585 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 SOX17Q9H6I2 414 aaPredicted RBP13.62□□□□□ -0.23
TRIM4-201ENST00000349062 RC3H2Q9HBD1 1191 aaKnown RBP13.62□□□□□ -0.23
TRIM4-201ENST00000349062 CMTM6Q9NX76 183 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 ZDHHC7Q9NXF8 308 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 BCAP29Q9UHQ4 241 aa13.62□□□□□ -0.23
TRIM4-201ENST00000349062 LILRB3O75022 631 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 BCAS2O75934 225 aaPredicted RBP13.61□□□□□ -0.23
TRIM4-201ENST00000349062 RSL1D1O76021 490 aaKnown RBP13.61□□□□□ -0.23
TRIM4-201ENST00000349062 OXTRP30559 389 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 ST8SIA6P61647 398 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 TTLL9Q3SXZ7 439 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 FAM174BQ3ZCQ3 159 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 FNDC3BQ53EP0 1204 aaKnown RBP13.61□□□□□ -0.23
TRIM4-201ENST00000349062 LILRA6Q6PI73 481 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 CLVS1Q8IUQ0 354 aaPredicted RBP13.61□□□□□ -0.23
TRIM4-201ENST00000349062 FIG4Q92562 907 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 NCLNQ969V3 563 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 MYOCQ99972 504 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 ACAT2Q9BWD1 397 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 DUS2Q9NX74 493 aaKnown RBP13.61□□□□□ -0.23
TRIM4-201ENST00000349062 PCDHB1Q9Y5F3 818 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 ZSCAN9O15535 394 aaPredicted RBP13.61□□□□□ -0.23
TRIM4-201ENST00000349062 STK16O75716 305 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 C1SP09871 688 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 BMPR1AP36894 532 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 LIPEQ05469 1076 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 PTCHD3Q3KNS1 767 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 GTDC1Q4AE62 458 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 ADGRG6Q86SQ4 1221 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 KLK6Q92876 244 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 VPS50Q96JG6 964 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 SEZ6LQ9BYH1 1024 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 ELOVL6Q9H5J4 265 aa13.61□□□□□ -0.23
TRIM4-201ENST00000349062 RFXAPO00287 272 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 OR56A5P0C7T3 313 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 NFKB2Q00653 900 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 B4GALNT1Q00973 533 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ADGRE1Q14246 886 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 DUS1LQ6P1R4 473 aaKnown RBP13.6□□□□□ -0.23
TRIM4-201ENST00000349062 CYP20A1Q6UW02 462 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 GALNT7Q86SF2 657 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 TRAPPC5Q8IUR0 188 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 PHACTR4Q8IZ21 702 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 LIX1Q8N485 282 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 FBXO30Q8TB52 745 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 PNPT1Q8TCS8 783 aaKnown RBP13.6□□□□□ -0.23
TRIM4-201ENST00000349062 SPPL3Q8TCT6 385 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 RNF145Q96MT1 663 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 BTBD9Q96Q07 612 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ASB2Q96Q27 587 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 CRISPLD2Q9H0B8 497 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 POPDC3Q9HBV1 291 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 GID8Q9NWU2 228 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 NUDT4Q9NZJ9 180 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 MOSPD1Q9UJG1 213 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 DMTF1Q9Y222 760 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 CFAP20Q9Y6A4 193 aaKnown RBP13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ACOT8O14734 319 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 OLFM2O95897 454 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 OTCP00480 354 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 PENKP01210 267 aaPredicted RBP13.6□□□□□ -0.23
TRIM4-201ENST00000349062 GBAP04062 536 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 NSG1P42857 185 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 IL1RL1Q01638 556 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 SELPLGQ14242 412 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 STARD3Q14849 445 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 HERC3Q15034 1050 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 CCSMST1Q4G0I0 132 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ANKRD26P1Q6NSI1 321 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 KLHL35Q6PF15 583 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 TXNDC11Q6PKC3 985 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ZBTB49Q6ZSB9 765 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 GPR156Q8NFN8 814 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ASB9Q96DX5 294 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 APOLD1Q96LR9 279 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 SLC29A1Q99808 456 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 PAIP1Q9H074 479 aaKnown RBP13.6□□□□□ -0.23
TRIM4-201ENST00000349062 TBC1D3BA6NDS4 549 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 HTRA2O43464 458 aaPredicted RBP13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ANXA5P08758 320 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ELFN1P0C7U0 828 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ENTPD1P49961 510 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 GRM2Q14416 872 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 OGFRL1Q5TC84 451 aaPredicted RBP13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ZNF783Q6ZMS7 281 aa13.6□□□□□ -0.23
TRIM4-201ENST00000349062 ADGRD2Q7Z7M1 963 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms