RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 UTP6Q9NYH9 597 aaKnown RBP26.39■■□□□ 1.82
SSBP4-202ENST00000348495 NUDT4Q9NZJ9 180 aa26.39■■□□□ 1.82
SSBP4-202ENST00000348495 SPASTQ9UBP0 616 aa26.39■■□□□ 1.82
SSBP4-202ENST00000348495 FFAR2O15552 330 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 TDRD6O60522 2096 aaKnown RBP26.39■■□□□ 1.81
SSBP4-202ENST00000348495 CATP04040 527 aaKnown RBP26.39■■□□□ 1.81
SSBP4-202ENST00000348495 TPBGLP0DKB5 382 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 F3P13726 295 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 TAC1P20366 129 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 CYP2A7P20853 494 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 RPIAP49247 311 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 CDKL1Q00532 357 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 NFKB2Q00653 900 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 TCF15Q12870 199 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 SLC23A3Q6PIS1 610 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 TAF8Q7Z7C8 310 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 PDPRQ8NCN5 879 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 ZNF548Q8NEK5 533 aaPredicted RBP26.39■■□□□ 1.81
SSBP4-202ENST00000348495 EXT2Q93063 718 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 ELF4Q99607 663 aaPredicted RBP26.39■■□□□ 1.81
SSBP4-202ENST00000348495 SIRPGQ9P1W8 387 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 ASF1AQ9Y294 204 aa26.39■■□□□ 1.81
SSBP4-202ENST00000348495 A8MT66 165 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 SUPT3HB4E1H0 165 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 SUPT3HO75486 399 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 PIAS2O75928 621 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 MDH1P40925 334 aaKnown RBP26.38■■□□□ 1.81
SSBP4-202ENST00000348495 BDKRB1P46663 353 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 IL9RQ01113 521 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 GRIK2Q13002 908 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 SHBQ15464 509 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 CDKL4Q5MAI5 379 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 MCOLN3Q8TDD5 553 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 C12orf66Q96MD2 445 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 PRRX2Q99811 253 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 PCDHGA5Q9Y5G8 931 aa26.38■■□□□ 1.81
SSBP4-202ENST00000348495 CFAP20Q9Y6A4 193 aaKnown RBP26.38■■□□□ 1.81
SSBP4-202ENST00000348495 WDR91A4D1P6 747 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 AP1S2P56377 157 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 GUCY1A3Q02108 690 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 RPE65Q16518 533 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 ZNF423Q2M1K9 1284 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 CCSMST1Q4G0I0 132 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 SDR16C5Q8N3Y7 309 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 PRSS33Q8NF86 280 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 OR5K2Q8NHB8 316 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 LMX1AQ8TE12 382 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 CCDC126Q96EE4 140 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 TRIM54Q9BYV2 358 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 TMCO1Q9UM00 188 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 TMEM131Q92545 1883 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 PCDH15Q96QU1 1955 aa26.37■■□□□ 1.81
SSBP4-202ENST00000348495 OR52A4PA6NMU1 304 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 PATE3B3GLJ2 98 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 SMIM24O75264 130 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 IPO13O94829 963 aaKnown RBP26.36■■□□□ 1.81
SSBP4-202ENST00000348495 CFIP05156 583 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 HALP42357 657 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 PRKAA2P54646 552 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 NUDCD3Q8IVD9 361 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 PHC3Q8NDX5 983 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 OR5AR1Q8NGP9 310 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 CD274Q9NZQ7 290 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 SLC6A14Q9UN76 642 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 ANKRD12Q6UB98 2062 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 MYO1CO00159 1063 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 AQP9O43315 295 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 HIST1H2AGP0C0S8 130 aaPredicted RBP26.36■■□□□ 1.81
SSBP4-202ENST00000348495 MTHFD1P11586 935 aaKnown RBP26.36■■□□□ 1.81
SSBP4-202ENST00000348495 HIST1H2ADP20671 130 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 MAP4P27816 1152 aaKnown RBP26.36■■□□□ 1.81
SSBP4-202ENST00000348495 DNAJB13P59910 316 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 PFKFB4Q16877 469 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 TRIM61Q5EBN2 209 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 DUS1LQ6P1R4 473 aaKnown RBP26.36■■□□□ 1.81
SSBP4-202ENST00000348495 IYDQ6PHW0 289 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 MBOAT1Q6ZNC8 495 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 GKN2Q86XP6 184 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 DCUN1D3Q8IWE4 304 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 TBC1D21Q8IYX1 336 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 OR6Y1Q8NGX8 325 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 CKAP2Q8WWK9 683 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 HIST1H2AHQ96KK5 128 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 HIST1H2AJQ99878 128 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 H2AFJQ9BTM1 129 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 FSCN3Q9NQT6 498 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 IMP3Q9NV31 184 aaKnown RBP26.36■■□□□ 1.81
SSBP4-202ENST00000348495 ARL15Q9NXU5 204 aa26.36■■□□□ 1.81
SSBP4-202ENST00000348495 ZNF624Q9P2J8 865 aaPredicted RBP26.36■■□□□ 1.81
SSBP4-202ENST00000348495 ARHGEF17Q96PE2 2063 aaPredicted RBP26.36■■□□□ 1.81
SSBP4-202ENST00000348495 KRT87PA6NCN2 255 aa26.35■■□□□ 1.81
SSBP4-202ENST00000348495 NCF1BA6NI72 391 aaPredicted RBP26.35■■□□□ 1.81
SSBP4-202ENST00000348495 NCF1CA8MVU1 366 aaPredicted RBP26.35■■□□□ 1.81
SSBP4-202ENST00000348495 LMO7DNF2Z398 122 aa26.35■■□□□ 1.81
SSBP4-202ENST00000348495 GUCA1CO95843 209 aa26.35■■□□□ 1.81
SSBP4-202ENST00000348495 RPN2P04844 631 aa26.35■■□□□ 1.81
SSBP4-202ENST00000348495 FGF3P11487 239 aaPredicted RBP26.35■■□□□ 1.81
SSBP4-202ENST00000348495 GFAPP14136 432 aa26.35■■□□□ 1.81
SSBP4-202ENST00000348495 NCF1P14598 390 aaPredicted RBP26.35■■□□□ 1.81
SSBP4-202ENST00000348495 MPLP40238 635 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms