RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 ZNF749O43361 778 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 MSL3P1P0C860 447 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 AGXTP21549 392 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 COPS2P61201 443 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 GPR33Q49SQ1 333 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 SLC6A19Q695T7 634 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 CDHR3Q6ZTQ4 885 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 TAS2R42Q7RTR8 314 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 HOOK3Q86VS8 718 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 SERPINA9Q86WD7 417 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 Q8NA96 180 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 N4BP2L2Q92802 583 aaPredicted RBP23.62■■□□□ 1.37
CDKN3-202ENST00000335183 DNAJC1Q96KC8 554 aaKnown RBP23.62■■□□□ 1.37
CDKN3-202ENST00000335183 SPATA13Q96N96 652 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 PADI2Q9Y2J8 665 aa23.62■■□□□ 1.37
CDKN3-202ENST00000335183 SNRNP200O75643 2136 aaKnown RBP23.61■■□□□ 1.37
CDKN3-202ENST00000335183 HBQ1P09105 142 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 PRSS56P0CW18 603 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 ACRV1P26436 265 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 OTX2P32243 289 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 CD151P48509 253 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 TBX2Q13207 712 aaPredicted RBP23.61■■□□□ 1.37
CDKN3-202ENST00000335183 KYNUQ16719 465 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 DENND5AQ6IQ26 1287 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 HPS6Q86YV9 775 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 GPR135Q8IZ08 494 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 ADGRF3Q8IZF5 1079 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 RBMXL3Q8N7X1 1067 aaKnown RBP23.61■■□□□ 1.37
CDKN3-202ENST00000335183 TFGQ92734 400 aaPredicted RBP23.61■■□□□ 1.37
CDKN3-202ENST00000335183 LRRC45Q96CN5 670 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 SGSM3Q96HU1 749 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 DPH2Q9BQC3 489 aaPredicted RBP23.61■■□□□ 1.37
CDKN3-202ENST00000335183 SLC29A3Q9BZD2 475 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 OSBPL8Q9BZF1 889 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 CASS4Q9NQ75 786 aa23.61■■□□□ 1.37
CDKN3-202ENST00000335183 TCP11X1B4DZS4 312 aa23.6■■□□□ 1.37
CDKN3-202ENST00000335183 PJA2O43164 708 aa23.6■■□□□ 1.37
CDKN3-202ENST00000335183 LDB2O43679 373 aa23.6■■□□□ 1.37
CDKN3-202ENST00000335183 PTMSP20962 102 aa23.6■■□□□ 1.37
CDKN3-202ENST00000335183 CTNNA1P35221 906 aaKnown RBP23.6■■□□□ 1.37
CDKN3-202ENST00000335183 MRPL49Q13405 166 aaKnown RBP23.6■■□□□ 1.37
CDKN3-202ENST00000335183 SPA17Q15506 151 aa23.6■■□□□ 1.37
CDKN3-202ENST00000335183 EIF2S3LQ2VIR3 472 aaKnown RBP23.6■■□□□ 1.37
CDKN3-202ENST00000335183 ZNF658BQ4V348 819 aaPredicted RBP23.6■■□□□ 1.37
CDKN3-202ENST00000335183 TRIM73Q86UV7 250 aa23.6■■□□□ 1.37
CDKN3-202ENST00000335183 GLIS1Q8NBF1 620 aa23.6■■□□□ 1.37
CDKN3-202ENST00000335183 PNPLA2Q96AD5 504 aa23.6■■□□□ 1.37
CDKN3-202ENST00000335183 PPP1R2P1Q96PQ5 205 aa23.6■■□□□ 1.37
CDKN3-202ENST00000335183 TSPY26PQ9H489 355 aa23.6■■□□□ 1.37
CDKN3-202ENST00000335183 IGLV3-16A0A075B6K0 115 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 RNF224P0DH78 156 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 RPA4Q13156 261 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 BOP1Q14137 746 aaKnown RBP23.59■■□□□ 1.37
CDKN3-202ENST00000335183 DEFB110Q30KQ9 67 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 MLIPQ5VWP3 458 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 ZNF385CQ66K41 422 aaPredicted RBP23.59■■□□□ 1.37
CDKN3-202ENST00000335183 SPESP1Q6UW49 350 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 CLDN19Q8N6F1 224 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 C19orf47Q8N9M1 422 aaKnown RBP23.59■■□□□ 1.37
CDKN3-202ENST00000335183 PRR7Q8TB68 274 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 SMAD5Q99717 465 aaKnown RBP23.59■■□□□ 1.37
CDKN3-202ENST00000335183 C19orf43Q9BQ61 176 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 ARNT2Q9HBZ2 717 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 FEZ2Q9UHY8 353 aaPredicted RBP23.59■■□□□ 1.37
CDKN3-202ENST00000335183 ICKQ9UPZ9 632 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 EFR3BQ9Y2G0 817 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 PCDHA3Q9Y5H8 950 aa23.59■■□□□ 1.37
CDKN3-202ENST00000335183 TRBV5-4A0A0C4DH59 114 aa23.58■■□□□ 1.37
CDKN3-202ENST00000335183 A1L4Q6 167 aa23.58■■□□□ 1.37
CDKN3-202ENST00000335183 CBSLP0DN79 551 aa23.58■■□□□ 1.37
CDKN3-202ENST00000335183 TPH1P17752 444 aa23.58■■□□□ 1.37
CDKN3-202ENST00000335183 CBSP35520 551 aa23.58■■□□□ 1.37
CDKN3-202ENST00000335183 C1orf189Q5VU69 101 aa23.58■■□□□ 1.37
CDKN3-202ENST00000335183 TC2NQ8N9U0 490 aa23.58■■□□□ 1.37
CDKN3-202ENST00000335183 OR5AR1Q8NGP9 310 aa23.58■■□□□ 1.37
CDKN3-202ENST00000335183 DHRS4Q9BTZ2 278 aa23.58■■□□□ 1.37
CDKN3-202ENST00000335183 FAM60AQ9NP50 221 aa23.58■■□□□ 1.37
CDKN3-202ENST00000335183 LUC7LQ9NQ29 371 aaKnown RBP23.58■■□□□ 1.37
CDKN3-202ENST00000335183 CUEDC1Q9NWM3 386 aaPredicted RBP23.58■■□□□ 1.37
CDKN3-202ENST00000335183 GPN3Q9UHW5 284 aaPredicted RBP23.58■■□□□ 1.37
CDKN3-202ENST00000335183 ANKRD12Q6UB98 2062 aa23.58■■□□□ 1.36
CDKN3-202ENST00000335183 OR2B3O76000 313 aa23.57■■□□□ 1.36
CDKN3-202ENST00000335183 UGT2B7P16662 529 aa23.57■■□□□ 1.36
CDKN3-202ENST00000335183 NAP1L1P55209 391 aaKnown RBP23.57■■□□□ 1.36
CDKN3-202ENST00000335183 BRD3Q15059 726 aa23.57■■□□□ 1.36
CDKN3-202ENST00000335183 AADACL2Q6P093 401 aa23.57■■□□□ 1.36
CDKN3-202ENST00000335183 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.57■■□□□ 1.36
CDKN3-202ENST00000335183 NLE1Q9NVX2 485 aaPredicted RBP23.57■■□□□ 1.36
CDKN3-202ENST00000335183 SMARCAL1Q9NZC9 954 aa23.57■■□□□ 1.36
CDKN3-202ENST00000335183 ASF1AQ9Y294 204 aa23.57■■□□□ 1.36
CDKN3-202ENST00000335183 PTRH2Q9Y3E5 179 aaKnown RBP23.57■■□□□ 1.36
CDKN3-202ENST00000335183 HIVEP3Q5T1R4 2406 aa23.57■■□□□ 1.36
CDKN3-202ENST00000335183 NUP210LQ5VU65 1888 aa23.56■■□□□ 1.36
CDKN3-202ENST00000335183 H7C0S8 307 aa23.56■■□□□ 1.36
CDKN3-202ENST00000335183 KLF7O75840 302 aaPredicted RBP23.56■■□□□ 1.36
CDKN3-202ENST00000335183 VARSP26640 1264 aaKnown RBP23.56■■□□□ 1.36
CDKN3-202ENST00000335183 SHMT2P34897 504 aa23.56■■□□□ 1.36
CDKN3-202ENST00000335183 PTPN7P35236 360 aa23.56■■□□□ 1.36
CDKN3-202ENST00000335183 CYLC1P35663 651 aaPredicted RBP23.56■■□□□ 1.36
CDKN3-202ENST00000335183 CACNG1Q06432 222 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms