RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 CDKL4Q5MAI5 379 aa17.03■□□□□ 0.32
DDX28-201ENST00000332395 UBE2R2Q712K3 238 aaPredicted RBP17.03■□□□□ 0.32
DDX28-201ENST00000332395 TRIM46Q7Z4K8 759 aa17.03■□□□□ 0.32
DDX28-201ENST00000332395 AHI1Q8N157 1196 aa17.03■□□□□ 0.32
DDX28-201ENST00000332395 ANKFN1Q8N957 763 aa17.03■□□□□ 0.32
DDX28-201ENST00000332395 CYB5D2Q8WUJ1 264 aa17.03■□□□□ 0.32
DDX28-201ENST00000332395 HEPHQ9BQS7 1158 aa17.03■□□□□ 0.32
DDX28-201ENST00000332395 ZNF490Q9ULM2 529 aaPredicted RBP17.03■□□□□ 0.32
DDX28-201ENST00000332395 KIAA0100Q14667 2235 aaKnown RBP17.03■□□□□ 0.32
DDX28-201ENST00000332395 ARNTLO00327 626 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 IFRD1O00458 451 aaPredicted RBP17.02■□□□□ 0.32
DDX28-201ENST00000332395 HNRNPRO43390 633 aaKnown RBP17.02■□□□□ 0.32
DDX28-201ENST00000332395 NUAK1O60285 661 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 IL10P22301 178 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 VARSP26640 1264 aaKnown RBP17.02■□□□□ 0.32
DDX28-201ENST00000332395 OXTRP30559 389 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 HMGCS1Q01581 520 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 GK3PQ14409 553 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 AAK1Q2M2I8 961 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 DLEU7Q6UYE1 221 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 RTL10Q7L3V2 364 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 KIAA0907Q7Z7F0 614 aaPredicted RBP17.02■□□□□ 0.32
DDX28-201ENST00000332395 HID1Q8IV36 788 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 ADGRG5Q8IZF4 528 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 ZNF784Q8NCA9 323 aaPredicted RBP17.02■□□□□ 0.32
DDX28-201ENST00000332395 FRS2Q8WU20 508 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 NUDT8Q8WV74 236 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 SKA2Q8WVK7 121 aaPredicted RBP17.02■□□□□ 0.32
DDX28-201ENST00000332395 SORCS1Q8WY21 1168 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 ARMC5Q96C12 935 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 ZSWIM3Q96MP5 696 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 SLC29A1Q99808 456 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 SLC12A9Q9BXP2 914 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 EPB41L1Q9H4G0 881 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 SLC32A1Q9H598 525 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 EIF3LQ9Y262 564 aaKnown RBP17.02■□□□□ 0.32
DDX28-201ENST00000332395 NOTCH4Q99466 2003 aa17.02■□□□□ 0.32
DDX28-201ENST00000332395 SMIM31A0A1B0GVY4 71 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 TTC34A8MYJ7 566 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 MANBAO00462 879 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 LEFTY1O75610 366 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 C8GP07360 202 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 CYP2A6P11509 494 aaPredicted RBP17.02■□□□□ 0.31
DDX28-201ENST00000332395 EPORP19235 508 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 VIPR1P32241 457 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 GGT5P36269 586 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 DGKQP52824 942 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 MAD2L1Q13257 205 aaPredicted RBP17.02■□□□□ 0.31
DDX28-201ENST00000332395 BOP1Q14137 746 aaKnown RBP17.02■□□□□ 0.31
DDX28-201ENST00000332395 PTGR1Q14914 329 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 SMU1Q2TAY7 513 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 SGO1Q5FBB7 561 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 PRR23BQ6ZRT6 265 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 HSD11B1LQ7Z5J1 315 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 VRK3Q8IV63 474 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 SPPL3Q8TCT6 385 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 SP7Q8TDD2 431 aaPredicted RBP17.02■□□□□ 0.31
DDX28-201ENST00000332395 USP7Q93009 1102 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 SCAMP4Q969E2 229 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 MRGPRX3Q96LB0 322 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 RAD9AQ99638 391 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 PARVBQ9HBI1 364 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 SMOXQ9NWM0 555 aa17.02■□□□□ 0.31
DDX28-201ENST00000332395 INPP4BO15327 924 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 MTX2O75431 263 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 CLDN9O95484 217 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 GPIP06744 558 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 NCK1P16333 377 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 EPCAMP16422 314 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 CKMT2P17540 419 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 GNPDA1P46926 289 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 CYP51A1Q16850 503 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 IMPG1Q17R60 797 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 ARSIQ5FYB1 569 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 TTC23LQ6PF05 361 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 SERPINA13PQ6UXR4 307 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 RGL4Q8IZJ4 473 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 ASB11Q8WXH4 323 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 PPM1MQ96MI6 270 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 SLC2A11Q9BYW1 496 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 SLC29A3Q9BZD2 475 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 FAM83DQ9H4H8 585 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 ACTR8Q9H981 624 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 NDUFA13Q9P0J0 144 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 MARK1Q9P0L2 795 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 PRRC2BQ5JSZ5 2229 aaKnown RBP17.01■□□□□ 0.31
DDX28-201ENST00000332395 SOBPA7XYQ1 873 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 HTR1EP28566 365 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 SOX11P35716 441 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 PRKCQQ04759 706 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 KIAA0040Q15053 153 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 ZXDCQ2QGD7 858 aaPredicted RBP17.01■□□□□ 0.31
DDX28-201ENST00000332395 AASDHQ4L235 1098 aaPredicted RBP17.01■□□□□ 0.31
DDX28-201ENST00000332395 PRSS36Q5K4E3 855 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 FBXO46Q6PJ61 603 aaPredicted RBP17.01■□□□□ 0.31
DDX28-201ENST00000332395 ZBTB49Q6ZSB9 765 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 Q6ZVL8 140 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 LEMD2Q8NC56 503 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 OSBPL11Q9BXB4 747 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 LRTM1Q9HBL6 345 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms