RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 FGF18O76093 207 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 KCNH1O95259 989 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 MT-ND1P03886 318 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 ANXA5P08758 320 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 GNAO1P09471 354 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 C7P10643 843 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 ZNF23P17027 643 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 EPORP19235 508 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 GNPDA1P46926 289 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 PLIN5Q00G26 463 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 SLC36A3Q495N2 470 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 PYCR3Q53H96 274 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 SGO1Q5FBB7 561 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 BORAQ6PGQ7 559 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 RIMKLAQ8IXN7 391 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 OR8J3Q8NGG0 315 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 BPIFB1Q8TDL5 484 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 GTF2H4Q92759 462 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 ULK4Q96C45 1275 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 SLC29A3Q9BZD2 475 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 DPY30Q9C005 99 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 LRTM1Q9HBL6 345 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 ZFP14Q9HCL3 533 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 ASIC5Q9NY37 505 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 PTTG2Q9NZH5 202 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 PDE10AQ9Y233 779 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 CCL26Q9Y258 94 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 V9GYQ6 96 aa14.26□□□□□ -0.13
TPM3-206ENST00000330188 DOCK6Q96HP0 2047 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 GRM6O15303 877 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 LDLRP01130 860 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 UGT2B4P06133 528 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 CDH1P12830 882 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 ITGB8P26012 769 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 AOAHP28039 575 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 RPIAP49247 311 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 GBX1Q14549 363 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 IMPG1Q17R60 797 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.25□□□□□ -0.13
TPM3-206ENST00000330188 CARD16Q5EG05 197 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 DPY19L3Q6ZPD9 716 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 GLB1L3Q8NCI6 653 aaPredicted RBP14.25□□□□□ -0.13
TPM3-206ENST00000330188 HM13Q8TCT9 377 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 OSCP1Q8WVF1 389 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 ZNF583Q96ND8 569 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 YME1L1Q96TA2 773 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 CORO1BQ9BR76 489 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 CHID1Q9BWS9 393 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 CLK4Q9HAZ1 481 aaKnown RBP14.25□□□□□ -0.13
TPM3-206ENST00000330188 TMPRSS11EQ9UL52 423 aa14.25□□□□□ -0.13
TPM3-206ENST00000330188 CCDC160A6NGH7 325 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 EIF3FO00303 357 aaPredicted RBP14.24□□□□□ -0.13
TPM3-206ENST00000330188 SEC22BO75396 215 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 CLTBP09497 229 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 GGT1P19440 569 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 GGT5P36269 586 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 CCR2P41597 374 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 ALDH3B2P48448 385 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 SPINT3P49223 89 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 ZXDCQ2QGD7 858 aaPredicted RBP14.24□□□□□ -0.13
TPM3-206ENST00000330188 FAM174BQ3ZCQ3 159 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 USP39Q53GS9 565 aaKnown RBP14.24□□□□□ -0.13
TPM3-206ENST00000330188 LRRC73Q5JTD7 316 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 CDKL4Q5MAI5 379 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 CACHD1Q5VU97 1274 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 SUSD1Q6UWL2 747 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 CCDC149Q6ZUS6 474 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 TMEM25Q86YD3 366 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 ELMOD1Q8N336 334 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 TRIML2Q8N7C3 387 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 CHST14Q8NCH0 376 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 RNF145Q96MT1 663 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 ZNF641Q96N77 438 aaPredicted RBP14.24□□□□□ -0.13
TPM3-206ENST00000330188 SLC32A1Q9H598 525 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 CLMPQ9H6B4 373 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 BRD9Q9H8M2 597 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 ARL15Q9NXU5 204 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 B4GALT6Q9UBX8 382 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 ZNHIT2Q9UHR6 403 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 ZNF639Q9UID6 485 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 MBD1Q9UIS9 605 aaPredicted RBP14.24□□□□□ -0.13
TPM3-206ENST00000330188 SLC25A13Q9UJS0 675 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 SLC8A2Q9UPR5 921 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 CLDN9O95484 217 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 POP4O95707 220 aaKnown RBP14.24□□□□□ -0.13
TPM3-206ENST00000330188 ANXA6P08133 673 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 OR56A5P0C7T3 313 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 CSF2RAP15509 400 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 AKT1P31749 480 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 SH3BGRP55822 239 aaPredicted RBP14.24□□□□□ -0.13
TPM3-206ENST00000330188 TUBA4AP68366 448 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 SPANXN4Q5MJ08 99 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 B3GNT6Q6ZMB0 384 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 UBE2R2Q712K3 238 aaPredicted RBP14.24□□□□□ -0.13
TPM3-206ENST00000330188 KRTCAP2Q8N6L1 136 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 KREMEN2Q8NCW0 462 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 SLC22A17Q8WUG5 538 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 MTFMTQ96DP5 389 aaKnown RBP14.24□□□□□ -0.13
TPM3-206ENST00000330188 CCDC115Q96NT0 180 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms