RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 FAM124BQ9H5Z6 455 aaPredicted RBP14.32□□□□□ -0.12
PTPN9-201ENST00000306726 RNF167Q9H6Y7 350 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 PRDM16Q9HAZ2 1276 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 PADI3Q9ULW8 664 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 EIF3LQ9Y262 564 aaKnown RBP14.32□□□□□ -0.12
PTPN9-201ENST00000306726 ARID1AO14497 2285 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 TANC1Q9C0D5 1861 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 TSC22D2O75157 780 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 PFKLP17858 780 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 PTNP21246 168 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 RAPSNQ13702 412 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 UBXN11Q5T124 520 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 TMEM199Q8N511 208 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 ANKFN1Q8N957 763 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 NTAN1Q96AB6 310 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 ROPN1LQ96C74 230 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 SERPINB11Q96P15 392 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 ASB8Q9H765 288 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 ELAC1Q9H777 363 aaKnown RBP14.31□□□□□ -0.12
PTPN9-201ENST00000306726 TESMINQ9Y4I5 508 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 NDUFB5O43674 189 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 ULK1O75385 1050 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 RASAL1O95294 804 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 OXSR1O95747 527 aaPredicted RBP14.31□□□□□ -0.12
PTPN9-201ENST00000306726 CXCL10P02778 98 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 MYF6P23409 242 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 HTR1BP28222 390 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 EPHA2P29317 976 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 ERVPABLB-1P60509 514 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 ATP6V0D1P61421 351 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 PDE12Q6L8Q7 609 aaKnown RBP14.31□□□□□ -0.12
PTPN9-201ENST00000306726 CYHR1Q6ZMK1 362 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 EGLN2Q96KS0 407 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 BARD1Q99728 777 aaKnown RBP14.31□□□□□ -0.12
PTPN9-201ENST00000306726 BOCQ9BWV1 1114 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 SLC2A11Q9BYW1 496 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 POLR3BQ9NW08 1133 aaPredicted RBP14.31□□□□□ -0.12
PTPN9-201ENST00000306726 GIN1Q9NXP7 522 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 GIT1Q9Y2X7 761 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 OAS3Q9Y6K5 1087 aaKnown RBP14.31□□□□□ -0.12
PTPN9-201ENST00000306726 AQP12BA6NM10 295 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 BMP10O95393 424 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 EOMESO95936 686 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 IGFBP5P24593 272 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 HPCAL1P37235 193 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 COPZ1P61923 177 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 RFTN1Q14699 578 aaPredicted RBP14.31□□□□□ -0.12
PTPN9-201ENST00000306726 CRY1Q16526 586 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 INTS6LQ5JSJ4 861 aaKnown RBP14.31□□□□□ -0.12
PTPN9-201ENST00000306726 CES5AQ6NT32 575 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 DOK6Q6PKX4 331 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 UBE2Q1Q7Z7E8 422 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 CACUL1Q86Y37 369 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 AQP12AQ8IXF9 295 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 MED8Q96G25 268 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 MTERF1Q99551 399 aaKnown RBP14.31□□□□□ -0.12
PTPN9-201ENST00000306726 ELOVL6Q9H5J4 265 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 GDAP2Q9NXN4 497 aa14.31□□□□□ -0.12
PTPN9-201ENST00000306726 TAF4O00268 1085 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 CXCR6O00574 342 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 SNPHO15079 494 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 RPP40O75818 363 aaKnown RBP14.3□□□□□ -0.12
PTPN9-201ENST00000306726 KRT75O95678 551 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 C1QCP02747 245 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 PKMP14618 531 aaKnown RBP14.3□□□□□ -0.12
PTPN9-201ENST00000306726 OR1E2P47887 323 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 MLLT6P55198 1093 aaPredicted RBP14.3□□□□□ -0.12
PTPN9-201ENST00000306726 DSC3Q14574 896 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 IHHQ14623 411 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 RUNDC3AQ59EK9 446 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 PRMT9Q6P2P2 845 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 AGMOQ6ZNB7 445 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 MRPL10Q7Z7H8 261 aaKnown RBP14.3□□□□□ -0.12
PTPN9-201ENST00000306726 STON2Q8WXE9 905 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 PROX1Q92786 737 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 LRRC3Q9BY71 257 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 TNKS2Q9H2K2 1166 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 IKZF5Q9H5V7 419 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 TLR8Q9NR97 1041 aaKnown RBP14.3□□□□□ -0.12
PTPN9-201ENST00000306726 CTPS2Q9NRF8 586 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 ARL15Q9NXU5 204 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 SEPT3Q9UH03 358 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 AP1G1O43747 822 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 CNOT3O75175 753 aaKnown RBP14.3□□□□□ -0.12
PTPN9-201ENST00000306726 KRT8P05787 483 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 GPIP06744 558 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 RHOCP08134 193 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 S100A3P33764 101 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 MAGEA12P43365 314 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 C6orf141Q5SZD1 244 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 TTC23Q5W5X9 447 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 RAPGEFL1Q9UHV5 662 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 XIRP2A4UGR9 3374 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 SAP18O00422 153 aaKnown RBP14.3□□□□□ -0.12
PTPN9-201ENST00000306726 RAD51BO15315 384 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 SLC25A14O95258 325 aaPredicted RBP14.3□□□□□ -0.12
PTPN9-201ENST00000306726 ATN1P54259 1190 aaPredicted RBP14.3□□□□□ -0.12
PTPN9-201ENST00000306726 MED22Q15528 200 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 MS4A13Q5J8X5 152 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 CACHD1Q5VU97 1274 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms