RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CAPRIN2Q6IMN6 1127 aaKnown RBP14.79□□□□□ -0.04
CCDC140-201ENST00000295226 MYO1HQ8N1T3 1032 aa14.79□□□□□ -0.04
CCDC140-201ENST00000295226 SEC16BQ96JE7 1060 aa14.79□□□□□ -0.04
CCDC140-201ENST00000295226 CABS1Q96KC9 395 aa14.79□□□□□ -0.04
CCDC140-201ENST00000295226 SCYL1Q96KG9 808 aa14.79□□□□□ -0.04
CCDC140-201ENST00000295226 C12orf66Q96MD2 445 aa14.79□□□□□ -0.04
CCDC140-201ENST00000295226 DERL2Q9GZP9 239 aa14.79□□□□□ -0.04
CCDC140-201ENST00000295226 KCNK9Q9NPC2 374 aa14.79□□□□□ -0.04
CCDC140-201ENST00000295226 RXFP3Q9NSD7 469 aa14.79□□□□□ -0.04
CCDC140-201ENST00000295226 ARID1BQ8NFD5 2236 aaPredicted RBP14.79□□□□□ -0.04
CCDC140-201ENST00000295226 OTOGLQ3ZCN5 2332 aa14.79□□□□□ -0.04
CCDC140-201ENST00000295226 LNP1A1A4G5 178 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 A6NCN8 305 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 LMNAP02545 664 aaKnown RBP14.78□□□□□ -0.04
CCDC140-201ENST00000295226 SYPP08247 313 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 MYF5P13349 255 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 ENO3P13929 434 aaPredicted RBP14.78□□□□□ -0.04
CCDC140-201ENST00000295226 BDKRB1P46663 353 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 RPA4Q13156 261 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 PRKG2Q13237 762 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 FAM83EQ2M2I3 478 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 UAP1L1Q3KQV9 507 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 CCSMST1Q4G0I0 132 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 N4BP2L1Q5TBK1 243 aaPredicted RBP14.78□□□□□ -0.04
CCDC140-201ENST00000295226 AGAP9Q5VTM2 703 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 C6orf89Q6UWU4 347 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 ISCA2Q86U28 154 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 PDZD3Q86UT5 571 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 GKN2Q86XP6 184 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 MINDY1Q8N5J2 469 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 CCDC197Q8NCU1 140 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 CKAP2Q8WWK9 683 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 ASB11Q8WXH4 323 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 TFGQ92734 400 aaPredicted RBP14.78□□□□□ -0.04
CCDC140-201ENST00000295226 EXT2Q93063 718 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 ALKBH8Q96BT7 664 aaKnown RBP14.78□□□□□ -0.04
CCDC140-201ENST00000295226 PDLIM5Q96HC4 596 aaKnown RBP14.78□□□□□ -0.04
CCDC140-201ENST00000295226 PLCD4Q9BRC7 762 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 IMP3Q9NV31 184 aaKnown RBP14.78□□□□□ -0.04
CCDC140-201ENST00000295226 CPSF2Q9P2I0 782 aaKnown RBP14.78□□□□□ -0.04
CCDC140-201ENST00000295226 ZNF624Q9P2J8 865 aaPredicted RBP14.78□□□□□ -0.04
CCDC140-201ENST00000295226 SLC17A7Q9P2U7 560 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 EMCNQ9ULC0 261 aa14.78□□□□□ -0.04
CCDC140-201ENST00000295226 EP300Q09472 2414 aaPredicted RBP14.78□□□□□ -0.04
CCDC140-201ENST00000295226 GOLGA4Q13439 2230 aaKnown RBP14.78□□□□□ -0.04
CCDC140-201ENST00000295226 KLHL33A6NCF5 533 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 LMO7DNF2Z398 122 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 TYROBPO43914 113 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 MATN4O95460 622 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 ANXA6P08133 673 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 GIMD1P0DJR0 217 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 MPC1LP0DKB6 136 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 EPHA8P29322 1005 aaPredicted RBP14.77□□□□□ -0.04
CCDC140-201ENST00000295226 CRHR1P34998 444 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 RPA3P35244 121 aaPredicted RBP14.77□□□□□ -0.04
CCDC140-201ENST00000295226 PLOD1Q02809 727 aaPredicted RBP14.77□□□□□ -0.04
CCDC140-201ENST00000295226 RPE65Q16518 533 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 PHKG1Q16816 387 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 LRRC8EQ6NSJ5 796 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 IL27RAQ6UWB1 636 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 ABRAXAS1Q6UWZ7 409 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 PIGWQ7Z7B1 504 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 NAGSQ8N159 534 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 FSTL5Q8N475 847 aaPredicted RBP14.77□□□□□ -0.04
CCDC140-201ENST00000295226 LMNTD1Q8N9Z9 388 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 OR5AR1Q8NGP9 310 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 TCP10LQ8TDR4 215 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 ZDHHC1Q8WTX9 485 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 APOPT1Q96IL0 206 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 FERD3LQ96RJ6 166 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 IRF2BPLQ9H1B7 796 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 NMRAL1Q9HBL8 299 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 PARD6AQ9NPB6 346 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 UTP6Q9NYH9 597 aaKnown RBP14.77□□□□□ -0.04
CCDC140-201ENST00000295226 NCDNQ9UBB6 729 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 DCDC2Q9UHG0 476 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 ASF1AQ9Y294 204 aa14.77□□□□□ -0.04
CCDC140-201ENST00000295226 ARHGEF33A8MVX0 844 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 TK2O00142 265 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 IFRD1O00458 451 aaPredicted RBP14.77□□□□□ -0.05
CCDC140-201ENST00000295226 ZNF806P0C7X5 589 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 COL6A2P12110 1019 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 F3P13726 295 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 SLC26A3P40879 764 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 SLC19A1P41440 591 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 IYDQ6PHW0 289 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 LVRNQ6Q4G3 990 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 SBSNQ6UWP8 590 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 MBOAT1Q6ZNC8 495 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 UBE2R2Q712K3 238 aaPredicted RBP14.77□□□□□ -0.05
CCDC140-201ENST00000295226 KANSL1Q7Z3B3 1105 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 TAX1BP1Q86VP1 789 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 SAP25Q8TEE9 199 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 JPH3Q8WXH2 748 aaPredicted RBP14.77□□□□□ -0.05
CCDC140-201ENST00000295226 GRAMD1AQ96CP6 724 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 MAGEB18Q96M61 343 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 TSNARE1Q96NA8 513 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 MLXIPLQ9NP71 852 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 SEMA4GQ9NTN9 838 aa14.77□□□□□ -0.05
CCDC140-201ENST00000295226 PLAGL1Q9UM63 463 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms