RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 TDRD12Q587J7 1177 aaKnown RBP9.54□□□□□ -0.88
LRTM1-201ENST00000273286 ANKRD20A8PQ5CZ79 823 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 IYDQ6PHW0 289 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 ARHGAP22Q7Z5H3 698 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 PLXDC1Q8IUK5 500 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 PHYKPLQ8IUZ5 450 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 LGI4Q8N135 537 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 CELF2-AS1Q8N7Q2 184 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 BMPERQ8N8U9 685 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 FAM71BQ8TC56 605 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 MAML1Q92585 1016 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 SYN2Q92777 582 aaPredicted RBP9.54□□□□□ -0.88
LRTM1-201ENST00000273286 SCAMP4Q969E2 229 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 TSGA13Q96PP4 275 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 ZNF670Q9BS34 389 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 ADGRE3Q9BY15 652 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 CARD9Q9H257 536 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 GPN2Q9H9Y4 310 aaPredicted RBP9.54□□□□□ -0.88
LRTM1-201ENST00000273286 ANAPC7Q9UJX3 599 aa9.54□□□□□ -0.88
LRTM1-201ENST00000273286 ZFC3H1O60293 1989 aaKnown RBP9.54□□□□□ -0.88
LRTM1-201ENST00000273286 BSNQ9UPA5 3926 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 LILRA5A6NI73 299 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 POLR1CO15160 346 aaPredicted RBP9.53□□□□□ -0.88
LRTM1-201ENST00000273286 DNAJC6O75061 913 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 CTPS1P17812 591 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 WT1P19544 449 aaPredicted RBP9.53□□□□□ -0.88
LRTM1-201ENST00000273286 CLCNKAP51800 687 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 CYP4F2P78329 520 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 TLE1Q04724 770 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 CLCA4Q14CN2 919 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 HENMT1Q5T8I9 393 aaKnown RBP9.53□□□□□ -0.88
LRTM1-201ENST00000273286 NKAIN2Q5VXU1 208 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 ANKS6Q68DC2 871 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 PDPK2PQ6A1A2 396 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 MARK2Q7KZI7 788 aaKnown RBP9.53□□□□□ -0.88
LRTM1-201ENST00000273286 CHST15Q7LFX5 561 aaPredicted RBP9.53□□□□□ -0.88
LRTM1-201ENST00000273286 ESX1Q8N693 406 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 APOBEC4Q8WW27 367 aaKnown RBP9.53□□□□□ -0.88
LRTM1-201ENST00000273286 JPH3Q8WXH2 748 aaPredicted RBP9.53□□□□□ -0.88
LRTM1-201ENST00000273286 RTP4Q96DX8 246 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 ZNF830Q96NB3 372 aaPredicted RBP9.53□□□□□ -0.88
LRTM1-201ENST00000273286 RIOK2Q9BVS4 552 aaKnown RBP9.53□□□□□ -0.88
LRTM1-201ENST00000273286 TRIM4Q9C037 500 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 FAM83DQ9H4H8 585 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 UCK1Q9HA47 277 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 PCDH9Q9HC56 1237 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 OCIAD1Q9NX40 245 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 MYOTQ9UBF9 498 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 ZNHIT2Q9UHR6 403 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 CD84Q9UIB8 345 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 TMEM98Q9Y2Y6 226 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 TMEM184BQ9Y519 407 aaPredicted RBP9.53□□□□□ -0.88
LRTM1-201ENST00000273286 NPFFR2Q9Y5X5 522 aa9.53□□□□□ -0.88
LRTM1-201ENST00000273286 MN1Q10571 1320 aaPredicted RBP9.52□□□□□ -0.89
LRTM1-201ENST00000273286 C1orf232A0A0U1RR37 186 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 ANKRD66B4E2M5 251 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 INPP4BO15327 924 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 MTA2O94776 668 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 PLATP00750 562 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 CYP1A2P05177 515 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 KRT7P08729 469 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 CASRP41180 1078 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 SPINT3P49223 89 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 TPM4P67936 248 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 ANO6Q4KMQ2 910 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 TEPPQ6URK8 271 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 KDELC2Q7Z4H8 507 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 RBM12BQ8IXT5 1001 aaKnown RBP9.52□□□□□ -0.89
LRTM1-201ENST00000273286 C9orf43Q8TAL5 461 aaPredicted RBP9.52□□□□□ -0.89
LRTM1-201ENST00000273286 NCSTNQ92542 709 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 HDAC11Q96DB2 347 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 SRPK1Q96SB4 655 aaKnown RBP9.52□□□□□ -0.89
LRTM1-201ENST00000273286 ZSCAN5AQ9BUG6 496 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 MLPHQ9BV36 600 aaPredicted RBP9.52□□□□□ -0.89
LRTM1-201ENST00000273286 NUP85Q9BW27 656 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 SPRY4Q9C004 299 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 XPO4Q9C0E2 1151 aaKnown RBP9.52□□□□□ -0.89
LRTM1-201ENST00000273286 THAP2Q9H0W7 228 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 RBM22Q9NW64 420 aaKnown RBP eCLIP9.52□□□□□ -0.89
LRTM1-201ENST00000273286 TMEM9Q9P0T7 183 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 TTLL3Q9Y4R7 772 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 LRRK2Q5S007 2527 aa9.52□□□□□ -0.89
LRTM1-201ENST00000273286 A6NCN8 305 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 PYCARD-AS1I3L0S3 204 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 GRID2O43424 1007 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 MFSD11O43934 449 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 STK17BO94768 372 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 CLDN7O95471 211 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 SERPINC1P01008 464 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 ATP1A1P05023 1023 aaKnown RBP9.51□□□□□ -0.89
LRTM1-201ENST00000273286 SERPING1P05155 500 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 ACP5P13686 325 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 TCF4P15884 667 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 ZNF28P17035 718 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 XRCC1P18887 633 aaPredicted RBP9.51□□□□□ -0.89
LRTM1-201ENST00000273286 IL4RP24394 825 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 SSR1P43307 286 aaKnown RBP9.51□□□□□ -0.89
LRTM1-201ENST00000273286 DCDC1P59894 354 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 DSC2Q02487 901 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 CDC20Q12834 499 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms