RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CYP20A1Q6UW02 462 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ZZZ3Q8IYH5 903 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 PNPLA1Q8N8W4 532 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 NPLOC4Q8TAT6 608 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 RTP4Q96DX8 246 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 CDKN2AIPNLQ96HQ2 116 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 FEM1CQ96JP0 617 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 OCEL1Q9H607 264 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 UCKL1Q9NWZ5 548 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 KLHL28Q9NXS3 571 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 PRELID1Q9Y255 219 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 RBM47A0AV96 593 aaKnown RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 INMTO95050 263 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 OGNP20774 298 aaKnown RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 RPS3AP61247 264 aaKnown RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ABRQ12979 859 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 KCNA10Q16322 511 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 TRIM71Q2Q1W2 868 aaKnown RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 USP41Q3LFD5 358 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 SIRPB2Q5JXA9 342 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 CYS1Q717R9 158 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 TRAPPC5Q8IUR0 188 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 TRIM48Q8IWZ4 208 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 YAF2Q8IY57 180 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 SLC7A5P1Q8MH63 180 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 BIRC8Q96P09 236 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 A0A1W2PP18 115 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 PRAMEF1O95521 474 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 C8BP07358 591 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 ELNP15502 786 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 SLC15A1P46059 708 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 MAPKAPK2P49137 400 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 GTF2H2Q13888 395 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 SMU1Q2TAY7 513 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF792Q3KQV3 632 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 SDE2Q6IQ49 451 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 GTF2H2CQ6P1K8 395 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 MZT2AQ6P582 158 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 SYCE2Q6PIF2 218 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 NUDT18Q6ZVK8 323 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 CNIH3Q8TBE1 160 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 NLNQ9BYT8 704 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 MFSD1Q9H3U5 465 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 HMX1Q9NP08 348 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-201ENST00000267199 PCDHB1Q9Y5F3 818 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 MYO9BQ13459 2157 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 OR6C70A6NIJ9 312 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 PLK4O00444 970 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 ATF4P18848 351 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-201ENST00000267199 MAP2K4P45985 399 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 UGT2B15P54855 530 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 FKBP1BP68106 108 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 BNC1Q01954 994 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 PTPRCAPQ14761 206 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 MSANTD2Q6P1R3 559 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 SLC15A3Q8IY34 581 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 TRNT1Q96Q11 434 aaKnown RBP11.35□□□□□ -0.59
VPS33A-201ENST00000267199 DHRS4Q9BTZ2 278 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 SPATA7Q9P0W8 599 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 GTF2IRD1Q9UHL9 959 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 PCDHGA10Q9Y5H3 936 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 SMIM30A4D0T7 59 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 DCLK1O15075 740 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 NOS1APO75052 506 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-201ENST00000267199 GNAO1P09471 354 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 IL4RP24394 825 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 ACVRL1P37023 503 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 LGALS3BPQ08380 585 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 NIPAL4Q0D2K0 466 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 GRB7Q14451 532 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 C5orf22Q49AR2 442 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 STEAP4Q687X5 459 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 TAPT1Q6NXT6 567 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 CERS6Q6ZMG9 384 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 UBE2R2Q712K3 238 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-201ENST00000267199 PIWIL3Q7Z3Z3 882 aaKnown RBP11.35□□□□□ -0.59
VPS33A-201ENST00000267199 CACUL1Q86Y37 369 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 GALNT12Q8IXK2 581 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 KCNC2Q96PR1 638 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF347Q96SE7 839 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 TMEM209Q96SK2 561 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 HEPHQ9BQS7 1158 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 TFB2MQ9H5Q4 396 aaKnown RBP11.35□□□□□ -0.59
VPS33A-201ENST00000267199 C11orf16Q9NQ32 467 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 CCM2LQ9NUG4 571 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-201ENST00000267199 TLR6Q9Y2C9 796 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 CDC7O00311 574 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 B4GAT1O43505 415 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 KLHL18O94889 574 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 ANXA11P50995 505 aaKnown RBP11.35□□□□□ -0.59
VPS33A-201ENST00000267199 BMXP51813 675 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 INHBEP58166 350 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF404Q494X3 552 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-201ENST00000267199 STARD8Q92502 1023 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 AP3S1Q92572 193 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 TMCO6Q96DC7 493 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 BEX2Q9BXY8 128 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 ZDHHC7Q9NXF8 308 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms