RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 DERL2Q9GZP9 239 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 PDP1Q9P0J1 537 aaPredicted RBP16.55■□□□□ 0.24
SGPP1-201ENST00000247225 UBA2Q9UBT2 640 aaPredicted RBP16.55■□□□□ 0.24
SGPP1-201ENST00000247225 TRPV2Q9Y5S1 764 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 PARP14Q460N5 1801 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 HTR3EA5X5Y0 456 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 E2F3O00716 465 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 DNTTP04053 509 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 DCTP40126 519 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 MASP1P48740 699 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 PON2Q15165 354 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 CCDC92Q53HC0 331 aaPredicted RBP16.55■□□□□ 0.24
SGPP1-201ENST00000247225 SCML4Q8N228 414 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 PPP1R2P1Q96PQ5 205 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 ACTL8Q9H568 366 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 SLC52A3Q9NQ40 469 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 FBXO10Q9UK96 956 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 TMEM221A6NGB7 291 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 A8MV72 311 aaPredicted RBP16.55■□□□□ 0.24
SGPP1-201ENST00000247225 CYP7B1O75881 506 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 PGRP06401 933 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 RPS17P08708 135 aaKnown RBP16.55■□□□□ 0.24
SGPP1-201ENST00000247225 INHBBP09529 407 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 BMP4P12644 408 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 POU2F1P14859 743 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 PWP1Q13610 501 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 CATSPEREQ5SY80 951 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 DOK6Q6PKX4 331 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 HORMAD1Q86X24 394 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 ZDHHC21Q8IVQ6 265 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 ADHFE1Q8IWW8 467 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 ZHX1-C8orf76Q96EF9 292 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 ZNF347Q96SE7 839 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 RNF167Q9H6Y7 350 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 TLR6Q9Y2C9 796 aa16.55■□□□□ 0.24
SGPP1-201ENST00000247225 GPC6Q9Y625 555 aaPredicted RBP16.55■□□□□ 0.24
SGPP1-201ENST00000247225 MKI67P46013 3256 aaKnown RBP16.54■□□□□ 0.24
SGPP1-201ENST00000247225 LOC285095A0A1B0GVY8 99 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 TYW5A2RUC4 315 aaKnown RBP16.54■□□□□ 0.24
SGPP1-201ENST00000247225 LOC730098B7Z3J9 87 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 CREG1O75629 220 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 VIPP01282 170 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 GGT1P19440 569 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 LPOP22079 712 aaPredicted RBP16.54■□□□□ 0.24
SGPP1-201ENST00000247225 ZFP36L2P47974 494 aaKnown RBP16.54■□□□□ 0.24
SGPP1-201ENST00000247225 NECAB2Q7Z6G3 386 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 P2RY8Q86VZ1 359 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 MCFD2Q8NI22 146 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 RHEBL1Q8TAI7 183 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 ATP13A3Q9H7F0 1226 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 SCN3BQ9NY72 215 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 RPL17P18621 184 aaKnown RBP16.54■□□□□ 0.24
SGPP1-201ENST00000247225 ZNF33AQ06730 810 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 UAP1L1Q3KQV9 507 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 C9orf131Q5VYM1 1079 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 AFTPHQ6ULP2 937 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 USP51Q70EK9 711 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 MAGED4Q96JG8 741 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 BTN2A3PQ96KV6 586 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 RBM4BQ9BQ04 359 aaKnown RBP16.54■□□□□ 0.24
SGPP1-201ENST00000247225 TRIM62Q9BVG3 475 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 RBM4Q9BWF3 364 aaKnown RBP16.54■□□□□ 0.24
SGPP1-201ENST00000247225 REXO4Q9GZR2 422 aaKnown RBP16.54■□□□□ 0.24
SGPP1-201ENST00000247225 GIN1Q9NXP7 522 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 VNN3Q9NY84 501 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 AGO1Q9UL18 857 aaKnown RBP16.54■□□□□ 0.24
SGPP1-201ENST00000247225 FCF1Q9Y324 198 aaKnown RBP16.54■□□□□ 0.24
SGPP1-201ENST00000247225 PCDHB14Q9Y5E9 798 aa16.54■□□□□ 0.24
SGPP1-201ENST00000247225 H0YAE9 185 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 FFAR2O15552 330 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 SLC25A14O95258 325 aaPredicted RBP16.53■□□□□ 0.24
SGPP1-201ENST00000247225 MYCP01106 439 aaPredicted RBP16.53■□□□□ 0.24
SGPP1-201ENST00000247225 CHRM5P08912 532 aaPredicted RBP16.53■□□□□ 0.24
SGPP1-201ENST00000247225 TNFRSF1BP20333 461 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 GSTM2P28161 218 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 ARHGDIAP52565 204 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 CDK5R2Q13319 367 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 TAF12Q16514 161 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 PHKG1Q16816 387 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 DGUOKQ16854 277 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 CACHD1Q5VU97 1274 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 CEP68Q76N32 757 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 CD200R1Q8TD46 325 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 UTP15Q8TED0 518 aaKnown RBP16.53■□□□□ 0.24
SGPP1-201ENST00000247225 APOLD1Q96LR9 279 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 MAGEE1Q9HCI5 957 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 SAMHD1Q9Y3Z3 626 aaKnown RBP16.53■□□□□ 0.24
SGPP1-201ENST00000247225 ZNF701M0R085 212 aaPredicted RBP16.53■□□□□ 0.24
SGPP1-201ENST00000247225 IGLV3-25P01717 112 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 CD36P16671 472 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 TACR2P21452 398 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 NFKB2Q00653 900 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 IL10RBQ08334 325 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 TUSC3Q13454 348 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 SLC14A2Q15849 920 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 CTSL3PQ5NE16 218 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 RIMKLAQ8IXN7 391 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 CLPBQ9H078 707 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 RMI1Q9H9A7 625 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 DDX28Q9NUL7 540 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms