RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 KPNA3O00505 521 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 NEMP1O14524 444 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 LINC01565O15544 149 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SMIM24O75264 130 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 THBS1P07996 1170 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SERPINA6P08185 405 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 HLA-EP13747 358 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 ITGB6P18564 788 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 TSPAN8P19075 237 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 NCF2P19878 526 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 LHCGRP22888 699 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 NFKBIAP25963 317 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 IDUAP35475 653 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SLC6A11P48066 632 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SUOXP51687 545 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CDH13P55290 713 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 IL2P60568 153 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 KDSRQ06136 332 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 COL9A2Q14055 689 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CHRNA6Q15825 494 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 FBXO48Q5FWF7 155 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CTSL3PQ5NE16 218 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 ATAT1Q5SQI0 421 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SH2D4BQ5SQS7 431 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SEL1L3Q68CR1 1132 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CES5AQ6NT32 575 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 UGT3A1Q6NUS8 523 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 GPR149Q86SP6 731 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CPNE9Q8IYJ1 553 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 RBFAQ8N0V3 343 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CPA6Q8N4T0 437 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 ERLEC1Q96DZ1 483 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 MRGPRX3Q96LB0 322 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SLC30A3Q99726 388 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 FAM83CQ9BQN1 747 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 NUF2Q9BZD4 464 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 POPDC3Q9HBV1 291 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 ZDHHC4Q9NPG8 344 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 GALPQ9UBC7 116 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SUCOQ9UBS9 1254 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 AASSQ9UDR5 926 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CD84Q9UIB8 345 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 RNF112Q9ULX5 631 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 PRELID1Q9Y255 219 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 TCF20Q9UGU0 1960 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 KNL1Q8NG31 2342 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 NUP210Q8TEM1 1887 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 GOLGA8QA0A0J9YX86 632 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 GOLGA8OA6NCC3 632 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SUPT3HB4E1H0 165 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 WASH3PC4AMC7 463 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 E9PBE3 544 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 GOLGA8NF8WBI6 632 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 BTN3A1O00481 513 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CDK2AP1O14519 115 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 GAPDHSO14556 408 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 HDAC3O15379 428 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SUPT3HO75486 399 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 DNAJC8O75937 253 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SIX3O95343 332 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 WISP3O95389 354 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 ASLP04424 464 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 ENO1P06733 434 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CTSLP07711 333 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SRPRAP08240 638 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CISD3P0C7P0 127 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 ESRRAP11474 423 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CYP2A6P11509 494 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 ACRV1P26436 265 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 TPP2P29144 1249 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 EPHA3P29320 983 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 NSG1P42857 185 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 ADARP55265 1226 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 KCNJ2P63252 427 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 TSNQ15631 228 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CDKN3Q16667 212 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 FNDC3BQ53EP0 1204 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 KRBOX4Q5JUW0 171 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SPDYAQ5MJ70 313 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 RPUSD3Q6P087 351 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 WDR73Q6P4I2 378 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SYCE2Q6PIF2 218 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SERPINA13PQ6UXR4 307 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 RFLNAQ6ZTI6 216 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 PLEKHM3Q6ZWE6 761 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 MAVSQ7Z434 540 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 YAF2Q8IY57 180 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 FAM9CQ8IZT9 166 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 PTGR2Q8N8N7 351 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 RHEBL1Q8TAI7 183 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 MAPK15Q8TD08 544 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 CD200R1Q8TD46 325 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 WFIKKN2Q8TEU8 576 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 EEF1AKMT1Q8WVE0 214 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 VOPP1Q96AW1 172 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 LINGO1Q96FE5 620 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 GDF15Q99988 308 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 SPATA16Q9BXB7 569 aa5.3□□□□□ -1.56
TRAPPC13-201ENST00000231526 DERL2Q9GZP9 239 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms