RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TTC4O95801 387 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 ESR1P03372 595 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 TPBGLP0DKB5 382 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 PKMP14618 531 aaKnown RBP12.33□□□□□ -0.44
LSM5-201ENST00000223084 POLR2CP19387 275 aaPredicted RBP12.33□□□□□ -0.44
LSM5-201ENST00000223084 CHRM3P20309 590 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 CARSP49589 748 aaKnown RBP12.33□□□□□ -0.44
LSM5-201ENST00000223084 ERVPABLB-1P60509 514 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 PLOD1Q02809 727 aaPredicted RBP12.33□□□□□ -0.44
LSM5-201ENST00000223084 CALCOCO2Q13137 446 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 TMED2Q15363 201 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 CACHD1Q5VU97 1274 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 TRMT10BQ6PF06 316 aaKnown RBP12.33□□□□□ -0.44
LSM5-201ENST00000223084 FBXO38Q6PIJ6 1188 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 OTOAQ7RTW8 1153 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 OOSP2Q86WS3 158 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 BBOF1Q8ND07 529 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 FBXO36Q8NEA4 188 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 SNIP1Q8TAD8 396 aaKnown RBP12.33□□□□□ -0.44
LSM5-201ENST00000223084 CALML6Q8TD86 181 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 ASZ1Q8WWH4 475 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 ART4Q93070 314 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 ZDHHC12Q96GR4 267 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 PPM1MQ96MI6 270 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 FAM167BQ9BTA0 163 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 NAT9Q9BTE0 207 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 LRRC1Q9BTT6 524 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 SRMSQ9H3Y6 488 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 HRASLS2Q9NWW9 162 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 FOXJ2Q9P0K8 574 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 EPHA6Q9UF33 1036 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 CIDEBQ9UHD4 219 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 RUVBL2Q9Y230 463 aaKnown RBP12.33□□□□□ -0.44
LSM5-201ENST00000223084 UTP11Q9Y3A2 253 aaKnown RBP12.33□□□□□ -0.44
LSM5-201ENST00000223084 MRFAP1Q9Y605 127 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 WDFY3Q8IZQ1 3526 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 E7ESA3 106 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 H3BMM5 538 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 BTN3A3O00478 584 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 BTN3A1O00481 513 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 GABRB3P28472 473 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 EIF2S3P41091 472 aaKnown RBP12.32□□□□□ -0.44
LSM5-201ENST00000223084 ABCG1P45844 678 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 KPNA2P52292 529 aaKnown RBP12.32□□□□□ -0.44
LSM5-201ENST00000223084 ADARP55265 1226 aaKnown RBP12.32□□□□□ -0.44
LSM5-201ENST00000223084 PCBP4P57723 403 aaKnown RBP12.32□□□□□ -0.44
LSM5-201ENST00000223084 STEAP4Q687X5 459 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 ARMC6Q6NXE6 501 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 KLHL35Q6PF15 583 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 CAPN12Q6ZSI9 719 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 CLEC14AQ86T13 490 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 LMNTD2Q8IXW0 634 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 TBC1D21Q8IYX1 336 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 ZBED8Q8IZ13 594 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 BMPERQ8N8U9 685 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 LMNTD1Q8N9Z9 388 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 C2CD4AQ8NCU7 369 aaPredicted RBP12.32□□□□□ -0.44
LSM5-201ENST00000223084 OR5K2Q8NHB8 316 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 SKA2Q8WVK7 121 aaPredicted RBP12.32□□□□□ -0.44
LSM5-201ENST00000223084 LRRC39Q96DD0 335 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 RNF31Q96EP0 1072 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 CERS2Q96G23 380 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 SLC30A3Q99726 388 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 MAP3K3Q99759 626 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 CTRCQ99895 268 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 RAB33BQ9H082 229 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 TRIT1Q9H3H1 467 aaKnown RBP12.32□□□□□ -0.44
LSM5-201ENST00000223084 TFB2MQ9H5Q4 396 aaKnown RBP12.32□□□□□ -0.44
LSM5-201ENST00000223084 SAYSD1Q9NPB0 183 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 PPANQ9NQ55 473 aaKnown RBP12.32□□□□□ -0.44
LSM5-201ENST00000223084 SLC39A1Q9NY26 324 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 ICKQ9UPZ9 632 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 VPS9D1Q9Y2B5 631 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 MED16Q9Y2X0 877 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 NFS1Q9Y697 457 aa12.32□□□□□ -0.44
LSM5-201ENST00000223084 SPTBP11277 2137 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 SDK2Q58EX2 2172 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 IGHV5-51A0A0C4DH38 117 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 ESYT3A0FGR9 886 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 GSAPA4D1B5 854 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 KRT87PA6NCN2 255 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 E5RI56 91 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 KIF2AO00139 706 aaPredicted RBP12.31□□□□□ -0.44
LSM5-201ENST00000223084 NDC80O14777 642 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 KPNA5O15131 536 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 NVLO15381 856 aaKnown RBP12.31□□□□□ -0.44
LSM5-201ENST00000223084 TUBB4AP04350 444 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 ANKRD34CP0C6C1 535 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 ITPKBP27987 946 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 MLLT3P42568 568 aaPredicted RBP12.31□□□□□ -0.44
LSM5-201ENST00000223084 BDKRB1P46663 353 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 CLCN7P51798 805 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 PLTPP55058 493 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 SH3BP2P78314 561 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 ACSBG2Q5FVE4 666 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 DNTTIP2Q5QJE6 756 aaKnown RBP12.31□□□□□ -0.44
LSM5-201ENST00000223084 PLEKHS1Q5SXH7 462 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 TEDDM1Q5T9Z0 273 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 ANKS6Q68DC2 871 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 C8orf74Q6P047 294 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms